Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5612 | 17059;17060;17061 | chr2:178732135;178732134;178732133 | chr2:179596862;179596861;179596860 |
N2AB | 5295 | 16108;16109;16110 | chr2:178732135;178732134;178732133 | chr2:179596862;179596861;179596860 |
N2A | 4368 | 13327;13328;13329 | chr2:178732135;178732134;178732133 | chr2:179596862;179596861;179596860 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs1060500588 | None | 1.0 | D | 0.826 | 0.596 | 0.614010665196 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | I | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1929 | likely_benign | 0.2022 | benign | -0.644 | Destabilizing | 0.974 | D | 0.647 | neutral | D | 0.583523988 | None | None | I |
G/C | 0.4161 | ambiguous | 0.4366 | ambiguous | -0.935 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.660177607 | None | None | I |
G/D | 0.5943 | likely_pathogenic | 0.5803 | pathogenic | -0.703 | Destabilizing | 1.0 | D | 0.854 | deleterious | D | 0.618216526 | None | None | I |
G/E | 0.5664 | likely_pathogenic | 0.5452 | ambiguous | -0.746 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
G/F | 0.836 | likely_pathogenic | 0.8557 | pathogenic | -0.973 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
G/H | 0.7253 | likely_pathogenic | 0.7237 | pathogenic | -1.233 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/I | 0.7312 | likely_pathogenic | 0.7515 | pathogenic | -0.23 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
G/K | 0.6198 | likely_pathogenic | 0.5906 | pathogenic | -0.954 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
G/L | 0.703 | likely_pathogenic | 0.7225 | pathogenic | -0.23 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
G/M | 0.7328 | likely_pathogenic | 0.7571 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/N | 0.6155 | likely_pathogenic | 0.6219 | pathogenic | -0.677 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
G/P | 0.9859 | likely_pathogenic | 0.9882 | pathogenic | -0.326 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/Q | 0.5433 | ambiguous | 0.5265 | ambiguous | -0.815 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/R | 0.4168 | ambiguous | 0.3916 | ambiguous | -0.765 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.659975803 | None | None | I |
G/S | 0.1559 | likely_benign | 0.1642 | benign | -1.036 | Destabilizing | 1.0 | D | 0.826 | deleterious | D | 0.634034083 | None | None | I |
G/T | 0.4293 | ambiguous | 0.4423 | ambiguous | -0.983 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
G/V | 0.5693 | likely_pathogenic | 0.5889 | pathogenic | -0.326 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.643926082 | None | None | I |
G/W | 0.7464 | likely_pathogenic | 0.7731 | pathogenic | -1.317 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
G/Y | 0.7826 | likely_pathogenic | 0.7989 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.