Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5613 | 17062;17063;17064 | chr2:178732132;178732131;178732130 | chr2:179596859;179596858;179596857 |
N2AB | 5296 | 16111;16112;16113 | chr2:178732132;178732131;178732130 | chr2:179596859;179596858;179596857 |
N2A | 4369 | 13330;13331;13332 | chr2:178732132;178732131;178732130 | chr2:179596859;179596858;179596857 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs397517483 | None | 0.011 | N | 0.217 | 0.068 | 0.132336055621 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs397517483 | None | 0.011 | N | 0.217 | 0.068 | 0.132336055621 | gnomAD-4.0.0 | 2.47881E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54289E-06 | 0 | 1.60108E-05 |
E/Q | rs2080652790 | None | 0.98 | N | 0.583 | 0.267 | 0.319114376414 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2122 | likely_benign | 0.2244 | benign | -0.583 | Destabilizing | 0.98 | D | 0.627 | neutral | N | 0.504083431 | None | None | N |
E/C | 0.887 | likely_pathogenic | 0.9118 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/D | 0.1578 | likely_benign | 0.1677 | benign | -0.968 | Destabilizing | 0.011 | N | 0.217 | neutral | N | 0.419312751 | None | None | N |
E/F | 0.7188 | likely_pathogenic | 0.7445 | pathogenic | -0.69 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/G | 0.2637 | likely_benign | 0.2958 | benign | -0.87 | Destabilizing | 0.961 | D | 0.627 | neutral | N | 0.496545791 | None | None | N |
E/H | 0.5396 | ambiguous | 0.5668 | pathogenic | -1.079 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
E/I | 0.3341 | likely_benign | 0.3579 | ambiguous | 0.168 | Stabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/K | 0.2079 | likely_benign | 0.2093 | benign | -0.209 | Destabilizing | 0.961 | D | 0.599 | neutral | N | 0.490767417 | None | None | N |
E/L | 0.4384 | ambiguous | 0.4609 | ambiguous | 0.168 | Stabilizing | 0.996 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/M | 0.46 | ambiguous | 0.4856 | ambiguous | 0.681 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/N | 0.2872 | likely_benign | 0.3015 | benign | -0.506 | Destabilizing | 0.97 | D | 0.597 | neutral | None | None | None | None | N |
E/P | 0.729 | likely_pathogenic | 0.7301 | pathogenic | -0.061 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/Q | 0.1751 | likely_benign | 0.1819 | benign | -0.437 | Destabilizing | 0.98 | D | 0.583 | neutral | N | 0.489364695 | None | None | N |
E/R | 0.3485 | ambiguous | 0.3531 | ambiguous | -0.249 | Destabilizing | 0.996 | D | 0.629 | neutral | None | None | None | None | N |
E/S | 0.2569 | likely_benign | 0.2767 | benign | -0.756 | Destabilizing | 0.97 | D | 0.59 | neutral | None | None | None | None | N |
E/T | 0.2614 | likely_benign | 0.2777 | benign | -0.515 | Destabilizing | 0.985 | D | 0.639 | neutral | None | None | None | None | N |
E/V | 0.2217 | likely_benign | 0.2352 | benign | -0.061 | Destabilizing | 0.998 | D | 0.69 | prob.neutral | N | 0.449750301 | None | None | N |
E/W | 0.9046 | likely_pathogenic | 0.916 | pathogenic | -0.651 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Y | 0.6182 | likely_pathogenic | 0.6488 | pathogenic | -0.471 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.