Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5614 | 17065;17066;17067 | chr2:178732129;178732128;178732127 | chr2:179596856;179596855;179596854 |
N2AB | 5297 | 16114;16115;16116 | chr2:178732129;178732128;178732127 | chr2:179596856;179596855;179596854 |
N2A | 4370 | 13333;13334;13335 | chr2:178732129;178732128;178732127 | chr2:179596856;179596855;179596854 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2080651364 | None | 0.999 | D | 0.824 | 0.743 | 0.885400995387 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs2080651364 | None | 0.999 | D | 0.824 | 0.743 | 0.885400995387 | gnomAD-4.0.0 | 6.57073E-06 | None | None | None | None | N | None | 2.4122E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9558 | likely_pathogenic | 0.9715 | pathogenic | -2.826 | Highly Destabilizing | 0.944 | D | 0.799 | deleterious | None | None | None | None | N |
Y/C | 0.6557 | likely_pathogenic | 0.7485 | pathogenic | -2.295 | Highly Destabilizing | 0.999 | D | 0.824 | deleterious | D | 0.661316994 | None | None | N |
Y/D | 0.9789 | likely_pathogenic | 0.9872 | pathogenic | -2.852 | Highly Destabilizing | 0.996 | D | 0.873 | deleterious | D | 0.661316994 | None | None | N |
Y/E | 0.9884 | likely_pathogenic | 0.9925 | pathogenic | -2.635 | Highly Destabilizing | 0.997 | D | 0.848 | deleterious | None | None | None | None | N |
Y/F | 0.1109 | likely_benign | 0.1175 | benign | -1.113 | Destabilizing | 0.039 | N | 0.471 | neutral | D | 0.552301407 | None | None | N |
Y/G | 0.9561 | likely_pathogenic | 0.971 | pathogenic | -3.276 | Highly Destabilizing | 0.992 | D | 0.869 | deleterious | None | None | None | None | N |
Y/H | 0.8423 | likely_pathogenic | 0.8854 | pathogenic | -2.04 | Highly Destabilizing | 0.996 | D | 0.751 | deleterious | D | 0.66111519 | None | None | N |
Y/I | 0.5457 | ambiguous | 0.5824 | pathogenic | -1.348 | Destabilizing | 0.968 | D | 0.79 | deleterious | None | None | None | None | N |
Y/K | 0.9791 | likely_pathogenic | 0.9855 | pathogenic | -2.196 | Highly Destabilizing | 0.992 | D | 0.85 | deleterious | None | None | None | None | N |
Y/L | 0.5967 | likely_pathogenic | 0.6336 | pathogenic | -1.348 | Destabilizing | 0.895 | D | 0.744 | deleterious | None | None | None | None | N |
Y/M | 0.7891 | likely_pathogenic | 0.8305 | pathogenic | -1.385 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
Y/N | 0.8849 | likely_pathogenic | 0.9183 | pathogenic | -2.985 | Highly Destabilizing | 0.996 | D | 0.843 | deleterious | D | 0.661316994 | None | None | N |
Y/P | 0.9955 | likely_pathogenic | 0.9971 | pathogenic | -1.854 | Destabilizing | 0.997 | D | 0.874 | deleterious | None | None | None | None | N |
Y/Q | 0.9767 | likely_pathogenic | 0.9845 | pathogenic | -2.663 | Highly Destabilizing | 0.997 | D | 0.783 | deleterious | None | None | None | None | N |
Y/R | 0.9584 | likely_pathogenic | 0.9698 | pathogenic | -2.079 | Highly Destabilizing | 0.992 | D | 0.836 | deleterious | None | None | None | None | N |
Y/S | 0.943 | likely_pathogenic | 0.9627 | pathogenic | -3.481 | Highly Destabilizing | 0.989 | D | 0.842 | deleterious | D | 0.661316994 | None | None | N |
Y/T | 0.9516 | likely_pathogenic | 0.9669 | pathogenic | -3.125 | Highly Destabilizing | 0.992 | D | 0.843 | deleterious | None | None | None | None | N |
Y/V | 0.5332 | ambiguous | 0.5697 | pathogenic | -1.854 | Destabilizing | 0.895 | D | 0.767 | deleterious | None | None | None | None | N |
Y/W | 0.6822 | likely_pathogenic | 0.7353 | pathogenic | -0.458 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.