Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5618 | 17077;17078;17079 | chr2:178732117;178732116;178732115 | chr2:179596844;179596843;179596842 |
N2AB | 5301 | 16126;16127;16128 | chr2:178732117;178732116;178732115 | chr2:179596844;179596843;179596842 |
N2A | 4374 | 13345;13346;13347 | chr2:178732117;178732116;178732115 | chr2:179596844;179596843;179596842 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs774980198 | -0.332 | 1.0 | N | 0.649 | 0.521 | 0.615473259424 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22767E-04 | None | 0 | None | 0 | 0 | 0 |
A/V | rs774980198 | -0.332 | 1.0 | N | 0.649 | 0.521 | 0.615473259424 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92901E-04 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs774980198 | -0.332 | 1.0 | N | 0.649 | 0.521 | 0.615473259424 | gnomAD-4.0.0 | 6.19878E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22846E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8511 | likely_pathogenic | 0.8636 | pathogenic | -1.944 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
A/D | 0.9928 | likely_pathogenic | 0.99 | pathogenic | -3.077 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.655948641 | None | None | N |
A/E | 0.9833 | likely_pathogenic | 0.9784 | pathogenic | -2.926 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
A/F | 0.904 | likely_pathogenic | 0.8971 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
A/G | 0.36 | ambiguous | 0.3526 | ambiguous | -1.755 | Destabilizing | 1.0 | D | 0.576 | neutral | D | 0.58705646 | None | None | N |
A/H | 0.9941 | likely_pathogenic | 0.9929 | pathogenic | -1.763 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
A/I | 0.5028 | ambiguous | 0.4681 | ambiguous | -0.343 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
A/K | 0.9949 | likely_pathogenic | 0.9933 | pathogenic | -1.474 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
A/L | 0.5421 | ambiguous | 0.5177 | ambiguous | -0.343 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
A/M | 0.6984 | likely_pathogenic | 0.6902 | pathogenic | -0.817 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
A/N | 0.9806 | likely_pathogenic | 0.977 | pathogenic | -1.848 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
A/P | 0.9892 | likely_pathogenic | 0.9864 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.630208725 | None | None | N |
A/Q | 0.9804 | likely_pathogenic | 0.9761 | pathogenic | -1.781 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
A/R | 0.9855 | likely_pathogenic | 0.9811 | pathogenic | -1.354 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
A/S | 0.4174 | ambiguous | 0.4058 | ambiguous | -2.174 | Highly Destabilizing | 1.0 | D | 0.575 | neutral | D | 0.607052981 | None | None | N |
A/T | 0.4998 | ambiguous | 0.4736 | ambiguous | -1.92 | Destabilizing | 1.0 | D | 0.782 | deleterious | D | 0.629603312 | None | None | N |
A/V | 0.2442 | likely_benign | 0.2178 | benign | -0.647 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.511076237 | None | None | N |
A/W | 0.9948 | likely_pathogenic | 0.994 | pathogenic | -1.493 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/Y | 0.9731 | likely_pathogenic | 0.971 | pathogenic | -1.068 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.