Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5619 | 17080;17081;17082 | chr2:178732114;178732113;178732112 | chr2:179596841;179596840;179596839 |
N2AB | 5302 | 16129;16130;16131 | chr2:178732114;178732113;178732112 | chr2:179596841;179596840;179596839 |
N2A | 4375 | 13348;13349;13350 | chr2:178732114;178732113;178732112 | chr2:179596841;179596840;179596839 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.27 | N | 0.257 | 0.115 | 0.313518423057 | gnomAD-4.0.0 | 1.59288E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86171E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2293 | likely_benign | 0.2147 | benign | -0.142 | Destabilizing | 0.013 | N | 0.151 | neutral | None | None | None | None | N |
Q/C | 0.4812 | ambiguous | 0.4495 | ambiguous | 0.165 | Stabilizing | 0.995 | D | 0.483 | neutral | None | None | None | None | N |
Q/D | 0.4536 | ambiguous | 0.4241 | ambiguous | -1.087 | Destabilizing | 0.495 | N | 0.265 | neutral | None | None | None | None | N |
Q/E | 0.0923 | likely_benign | 0.0898 | benign | -1.065 | Destabilizing | 0.27 | N | 0.257 | neutral | N | 0.469237352 | None | None | N |
Q/F | 0.558 | ambiguous | 0.5163 | ambiguous | -0.429 | Destabilizing | 0.981 | D | 0.502 | neutral | None | None | None | None | N |
Q/G | 0.2576 | likely_benign | 0.2313 | benign | -0.388 | Destabilizing | 0.495 | N | 0.472 | neutral | None | None | None | None | N |
Q/H | 0.161 | likely_benign | 0.1585 | benign | -0.682 | Destabilizing | 0.927 | D | 0.425 | neutral | N | 0.469066781 | None | None | N |
Q/I | 0.322 | likely_benign | 0.2915 | benign | 0.435 | Stabilizing | 0.944 | D | 0.527 | neutral | None | None | None | None | N |
Q/K | 0.0829 | likely_benign | 0.0743 | benign | 0.085 | Stabilizing | 0.002 | N | 0.103 | neutral | N | 0.474181812 | None | None | N |
Q/L | 0.1388 | likely_benign | 0.126 | benign | 0.435 | Stabilizing | 0.425 | N | 0.471 | neutral | N | 0.513105559 | None | None | N |
Q/M | 0.3479 | ambiguous | 0.3193 | benign | 0.981 | Stabilizing | 0.981 | D | 0.434 | neutral | None | None | None | None | N |
Q/N | 0.3471 | ambiguous | 0.314 | benign | -0.424 | Destabilizing | 0.704 | D | 0.259 | neutral | None | None | None | None | N |
Q/P | 0.7609 | likely_pathogenic | 0.6911 | pathogenic | 0.273 | Stabilizing | 0.784 | D | 0.497 | neutral | N | 0.51305343 | None | None | N |
Q/R | 0.0749 | likely_benign | 0.0709 | benign | 0.187 | Stabilizing | 0.006 | N | 0.105 | neutral | N | 0.431836544 | None | None | N |
Q/S | 0.258 | likely_benign | 0.2416 | benign | -0.37 | Destabilizing | 0.037 | N | 0.097 | neutral | None | None | None | None | N |
Q/T | 0.19 | likely_benign | 0.172 | benign | -0.191 | Destabilizing | 0.329 | N | 0.414 | neutral | None | None | None | None | N |
Q/V | 0.212 | likely_benign | 0.198 | benign | 0.273 | Stabilizing | 0.704 | D | 0.457 | neutral | None | None | None | None | N |
Q/W | 0.3368 | likely_benign | 0.3135 | benign | -0.441 | Destabilizing | 0.995 | D | 0.494 | neutral | None | None | None | None | N |
Q/Y | 0.378 | ambiguous | 0.3434 | ambiguous | -0.065 | Destabilizing | 0.981 | D | 0.476 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.