Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5620 | 17083;17084;17085 | chr2:178732111;178732110;178732109 | chr2:179596838;179596837;179596836 |
N2AB | 5303 | 16132;16133;16134 | chr2:178732111;178732110;178732109 | chr2:179596838;179596837;179596836 |
N2A | 4376 | 13351;13352;13353 | chr2:178732111;178732110;178732109 | chr2:179596838;179596837;179596836 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs747660270 | -0.776 | 0.287 | N | 0.248 | 0.339 | 0.233150807113 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
N/S | rs747660270 | -0.776 | 0.287 | N | 0.248 | 0.339 | 0.233150807113 | gnomAD-4.0.0 | 1.5932E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86272E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9802 | likely_pathogenic | 0.9716 | pathogenic | -0.264 | Destabilizing | 0.871 | D | 0.567 | neutral | None | None | None | None | N |
N/C | 0.9511 | likely_pathogenic | 0.9329 | pathogenic | 0.013 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
N/D | 0.9235 | likely_pathogenic | 0.9057 | pathogenic | -1.622 | Destabilizing | 0.961 | D | 0.579 | neutral | D | 0.555550638 | None | None | N |
N/E | 0.9904 | likely_pathogenic | 0.9873 | pathogenic | -1.574 | Destabilizing | 0.97 | D | 0.575 | neutral | None | None | None | None | N |
N/F | 0.9983 | likely_pathogenic | 0.9973 | pathogenic | -0.559 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
N/G | 0.9368 | likely_pathogenic | 0.9206 | pathogenic | -0.505 | Destabilizing | 0.931 | D | 0.569 | neutral | None | None | None | None | N |
N/H | 0.9492 | likely_pathogenic | 0.926 | pathogenic | -0.562 | Destabilizing | 0.998 | D | 0.596 | neutral | D | 0.522584585 | None | None | N |
N/I | 0.9792 | likely_pathogenic | 0.9687 | pathogenic | 0.304 | Stabilizing | 0.994 | D | 0.699 | prob.neutral | D | 0.557071575 | None | None | N |
N/K | 0.9934 | likely_pathogenic | 0.989 | pathogenic | 0.025 | Stabilizing | 0.961 | D | 0.575 | neutral | D | 0.556311107 | None | None | N |
N/L | 0.9662 | likely_pathogenic | 0.9565 | pathogenic | 0.304 | Stabilizing | 0.985 | D | 0.695 | prob.neutral | None | None | None | None | N |
N/M | 0.9729 | likely_pathogenic | 0.9647 | pathogenic | 0.821 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
N/P | 0.9958 | likely_pathogenic | 0.9939 | pathogenic | 0.142 | Stabilizing | 0.996 | D | 0.667 | neutral | None | None | None | None | N |
N/Q | 0.9926 | likely_pathogenic | 0.9889 | pathogenic | -0.96 | Destabilizing | 0.996 | D | 0.628 | neutral | None | None | None | None | N |
N/R | 0.9938 | likely_pathogenic | 0.9888 | pathogenic | 0.185 | Stabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
N/S | 0.5834 | likely_pathogenic | 0.5345 | ambiguous | -0.493 | Destabilizing | 0.287 | N | 0.248 | neutral | N | 0.48409467 | None | None | N |
N/T | 0.8423 | likely_pathogenic | 0.8065 | pathogenic | -0.31 | Destabilizing | 0.925 | D | 0.557 | neutral | D | 0.526178983 | None | None | N |
N/V | 0.9738 | likely_pathogenic | 0.964 | pathogenic | 0.142 | Stabilizing | 0.996 | D | 0.696 | prob.neutral | None | None | None | None | N |
N/W | 0.999 | likely_pathogenic | 0.9982 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
N/Y | 0.9772 | likely_pathogenic | 0.9624 | pathogenic | -0.113 | Destabilizing | 0.998 | D | 0.658 | neutral | D | 0.556818086 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.