Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5624 | 17095;17096;17097 | chr2:178732099;178732098;178732097 | chr2:179596826;179596825;179596824 |
N2AB | 5307 | 16144;16145;16146 | chr2:178732099;178732098;178732097 | chr2:179596826;179596825;179596824 |
N2A | 4380 | 13363;13364;13365 | chr2:178732099;178732098;178732097 | chr2:179596826;179596825;179596824 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.004 | N | 0.196 | 0.157 | 0.190952846119 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
S/T | None | None | 0.002 | N | 0.147 | 0.054 | 0.177238962908 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.08 | likely_benign | 0.0821 | benign | -0.372 | Destabilizing | 0.25 | N | 0.369 | neutral | None | None | None | None | N |
S/C | 0.1169 | likely_benign | 0.1309 | benign | -0.204 | Destabilizing | 0.99 | D | 0.488 | neutral | N | 0.512941752 | None | None | N |
S/D | 0.3001 | likely_benign | 0.2771 | benign | -0.549 | Destabilizing | 0.447 | N | 0.315 | neutral | None | None | None | None | N |
S/E | 0.3629 | ambiguous | 0.3239 | benign | -0.638 | Destabilizing | 0.447 | N | 0.333 | neutral | None | None | None | None | N |
S/F | 0.1495 | likely_benign | 0.1542 | benign | -0.909 | Destabilizing | 0.92 | D | 0.557 | neutral | None | None | None | None | N |
S/G | 0.0876 | likely_benign | 0.0926 | benign | -0.504 | Destabilizing | 0.379 | N | 0.301 | neutral | D | 0.527069535 | None | None | N |
S/H | 0.2009 | likely_benign | 0.1973 | benign | -1.05 | Destabilizing | 0.85 | D | 0.465 | neutral | None | None | None | None | N |
S/I | 0.1327 | likely_benign | 0.1324 | benign | -0.146 | Destabilizing | 0.681 | D | 0.551 | neutral | N | 0.502977799 | None | None | N |
S/K | 0.3095 | likely_benign | 0.2713 | benign | -0.621 | Destabilizing | 0.005 | N | 0.19 | neutral | None | None | None | None | N |
S/L | 0.0941 | likely_benign | 0.0976 | benign | -0.146 | Destabilizing | 0.447 | N | 0.513 | neutral | None | None | None | None | N |
S/M | 0.1597 | likely_benign | 0.1694 | benign | 0.296 | Stabilizing | 0.977 | D | 0.465 | neutral | None | None | None | None | N |
S/N | 0.0974 | likely_benign | 0.0975 | benign | -0.368 | Destabilizing | 0.004 | N | 0.196 | neutral | N | 0.506078444 | None | None | N |
S/P | 0.5482 | ambiguous | 0.5457 | ambiguous | -0.193 | Destabilizing | 0.92 | D | 0.442 | neutral | None | None | None | None | N |
S/Q | 0.295 | likely_benign | 0.2826 | benign | -0.717 | Destabilizing | 0.85 | D | 0.396 | neutral | None | None | None | None | N |
S/R | 0.2204 | likely_benign | 0.1968 | benign | -0.287 | Destabilizing | 0.681 | D | 0.406 | neutral | N | 0.49306307 | None | None | N |
S/T | 0.0704 | likely_benign | 0.0716 | benign | -0.405 | Destabilizing | 0.002 | N | 0.147 | neutral | N | 0.505064866 | None | None | N |
S/V | 0.1495 | likely_benign | 0.1556 | benign | -0.193 | Destabilizing | 0.447 | N | 0.493 | neutral | None | None | None | None | N |
S/W | 0.2409 | likely_benign | 0.2374 | benign | -0.908 | Destabilizing | 0.992 | D | 0.612 | neutral | None | None | None | None | N |
S/Y | 0.1467 | likely_benign | 0.1488 | benign | -0.641 | Destabilizing | 0.92 | D | 0.556 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.