Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5626 | 17101;17102;17103 | chr2:178732093;178732092;178732091 | chr2:179596820;179596819;179596818 |
N2AB | 5309 | 16150;16151;16152 | chr2:178732093;178732092;178732091 | chr2:179596820;179596819;179596818 |
N2A | 4382 | 13369;13370;13371 | chr2:178732093;178732092;178732091 | chr2:179596820;179596819;179596818 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs1226327061 | -0.001 | 0.302 | N | 0.401 | 0.234 | 0.337621943819 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
H/D | rs1226327061 | -0.001 | 0.302 | N | 0.401 | 0.234 | 0.337621943819 | gnomAD-4.0.0 | 3.42588E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.50297E-06 | 0 | 0 |
H/Y | None | None | 0.866 | N | 0.423 | 0.159 | 0.353548585375 | gnomAD-4.0.0 | 6.85176E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00594E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1918 | likely_benign | 0.1962 | benign | 0.124 | Stabilizing | 0.051 | N | 0.369 | neutral | None | None | None | None | N |
H/C | 0.1413 | likely_benign | 0.1376 | benign | 0.908 | Stabilizing | 0.004 | N | 0.363 | neutral | None | None | None | None | N |
H/D | 0.1751 | likely_benign | 0.1785 | benign | -0.073 | Destabilizing | 0.302 | N | 0.401 | neutral | N | 0.446227206 | None | None | N |
H/E | 0.2428 | likely_benign | 0.2438 | benign | -0.011 | Destabilizing | 0.365 | N | 0.295 | neutral | None | None | None | None | N |
H/F | 0.2168 | likely_benign | 0.2285 | benign | 1.054 | Stabilizing | 0.582 | D | 0.461 | neutral | None | None | None | None | N |
H/G | 0.2219 | likely_benign | 0.2304 | benign | -0.219 | Destabilizing | 0.2 | N | 0.38 | neutral | None | None | None | None | N |
H/I | 0.1874 | likely_benign | 0.188 | benign | 1.036 | Stabilizing | 0.002 | N | 0.378 | neutral | None | None | None | None | N |
H/K | 0.2008 | likely_benign | 0.1899 | benign | 0.305 | Stabilizing | 0.111 | N | 0.334 | neutral | None | None | None | None | N |
H/L | 0.1039 | likely_benign | 0.1055 | benign | 1.036 | Stabilizing | 0.086 | N | 0.383 | neutral | N | 0.455193406 | None | None | N |
H/M | 0.3586 | ambiguous | 0.3608 | ambiguous | 0.814 | Stabilizing | 0.83 | D | 0.503 | neutral | None | None | None | None | N |
H/N | 0.0819 | likely_benign | 0.0875 | benign | 0.324 | Stabilizing | 0.302 | N | 0.342 | neutral | N | 0.435183494 | None | None | N |
H/P | 0.3881 | ambiguous | 0.4135 | ambiguous | 0.757 | Stabilizing | 0.68 | D | 0.501 | neutral | N | 0.505910228 | None | None | N |
H/Q | 0.1328 | likely_benign | 0.132 | benign | 0.491 | Stabilizing | 0.512 | D | 0.373 | neutral | N | 0.420214041 | None | None | N |
H/R | 0.0792 | likely_benign | 0.0754 | benign | -0.418 | Destabilizing | None | N | 0.125 | neutral | N | 0.39612646 | None | None | N |
H/S | 0.1321 | likely_benign | 0.1313 | benign | 0.441 | Stabilizing | 0.022 | N | 0.214 | neutral | None | None | None | None | N |
H/T | 0.1484 | likely_benign | 0.141 | benign | 0.608 | Stabilizing | 0.008 | N | 0.286 | neutral | None | None | None | None | N |
H/V | 0.1665 | likely_benign | 0.1654 | benign | 0.757 | Stabilizing | 0.111 | N | 0.377 | neutral | None | None | None | None | N |
H/W | 0.3599 | ambiguous | 0.3403 | ambiguous | 1.144 | Stabilizing | 0.991 | D | 0.459 | neutral | None | None | None | None | N |
H/Y | 0.0835 | likely_benign | 0.0865 | benign | 1.356 | Stabilizing | 0.866 | D | 0.423 | neutral | N | 0.457868352 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.