Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5629 | 17110;17111;17112 | chr2:178732084;178732083;178732082 | chr2:179596811;179596810;179596809 |
N2AB | 5312 | 16159;16160;16161 | chr2:178732084;178732083;178732082 | chr2:179596811;179596810;179596809 |
N2A | 4385 | 13378;13379;13380 | chr2:178732084;178732083;178732082 | chr2:179596811;179596810;179596809 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs758096327 | -0.574 | 0.117 | N | 0.589 | 0.177 | 0.26547132957 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/N | rs758096327 | -0.574 | 0.117 | N | 0.589 | 0.177 | 0.26547132957 | gnomAD-4.0.0 | 6.40629E-06 | None | None | None | None | N | None | 0 | 6.87695E-05 | None | 0 | 0 | None | 0 | 0 | 2.8795E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0833 | likely_benign | 0.081 | benign | -0.967 | Destabilizing | 0.016 | N | 0.379 | neutral | None | None | None | None | N |
S/C | 0.0961 | likely_benign | 0.1021 | benign | -0.859 | Destabilizing | None | N | 0.342 | neutral | N | 0.441610821 | None | None | N |
S/D | 0.6923 | likely_pathogenic | 0.8397 | pathogenic | -1.529 | Destabilizing | 0.149 | N | 0.603 | neutral | None | None | None | None | N |
S/E | 0.8101 | likely_pathogenic | 0.8983 | pathogenic | -1.367 | Destabilizing | 0.149 | N | 0.644 | neutral | None | None | None | None | N |
S/F | 0.4776 | ambiguous | 0.5051 | ambiguous | -0.887 | Destabilizing | 0.555 | D | 0.766 | deleterious | None | None | None | None | N |
S/G | 0.0742 | likely_benign | 0.1136 | benign | -1.325 | Destabilizing | None | N | 0.135 | neutral | N | 0.454348044 | None | None | N |
S/H | 0.615 | likely_pathogenic | 0.744 | pathogenic | -1.645 | Destabilizing | 0.935 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/I | 0.2368 | likely_benign | 0.2969 | benign | -0.07 | Destabilizing | 0.317 | N | 0.785 | deleterious | N | 0.445456415 | None | None | N |
S/K | 0.8771 | likely_pathogenic | 0.9483 | pathogenic | -0.453 | Destabilizing | 0.149 | N | 0.623 | neutral | None | None | None | None | N |
S/L | 0.2034 | likely_benign | 0.208 | benign | -0.07 | Destabilizing | 0.081 | N | 0.685 | prob.neutral | None | None | None | None | N |
S/M | 0.3136 | likely_benign | 0.3434 | ambiguous | -0.074 | Destabilizing | 0.791 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/N | 0.2554 | likely_benign | 0.3685 | ambiguous | -1.071 | Destabilizing | 0.117 | N | 0.589 | neutral | N | 0.483415059 | None | None | N |
S/P | 0.8226 | likely_pathogenic | 0.8772 | pathogenic | -0.336 | Destabilizing | 0.555 | D | 0.78 | deleterious | None | None | None | None | N |
S/Q | 0.7316 | likely_pathogenic | 0.8392 | pathogenic | -0.943 | Destabilizing | 0.555 | D | 0.69 | prob.neutral | None | None | None | None | N |
S/R | 0.7918 | likely_pathogenic | 0.893 | pathogenic | -0.694 | Destabilizing | 0.484 | N | 0.777 | deleterious | D | 0.529768523 | None | None | N |
S/T | 0.101 | likely_benign | 0.1033 | benign | -0.787 | Destabilizing | 0.002 | N | 0.168 | neutral | N | 0.401590995 | None | None | N |
S/V | 0.2243 | likely_benign | 0.2422 | benign | -0.336 | Destabilizing | 0.081 | N | 0.71 | prob.delet. | None | None | None | None | N |
S/W | 0.63 | likely_pathogenic | 0.7253 | pathogenic | -1.067 | Destabilizing | 0.935 | D | 0.743 | deleterious | None | None | None | None | N |
S/Y | 0.4316 | ambiguous | 0.4908 | ambiguous | -0.658 | Destabilizing | 0.791 | D | 0.76 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.