Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5631 | 17116;17117;17118 | chr2:178732078;178732077;178732076 | chr2:179596805;179596804;179596803 |
N2AB | 5314 | 16165;16166;16167 | chr2:178732078;178732077;178732076 | chr2:179596805;179596804;179596803 |
N2A | 4387 | 13384;13385;13386 | chr2:178732078;178732077;178732076 | chr2:179596805;179596804;179596803 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs778807865 | -0.338 | 0.002 | N | 0.245 | 0.09 | 0.107399877778 | gnomAD-2.1.1 | 1.64E-05 | None | None | None | None | N | None | 0 | 2.93E-05 | None | 0 | 0 | None | 0 | None | 0 | 2.71E-05 | 0 |
V/I | rs778807865 | -0.338 | 0.002 | N | 0.245 | 0.09 | 0.107399877778 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
V/I | rs778807865 | -0.338 | 0.002 | N | 0.245 | 0.09 | 0.107399877778 | gnomAD-4.0.0 | 1.55489E-05 | None | None | None | None | N | None | 0 | 1.70497E-05 | None | 0 | 0 | None | 0 | 0 | 2.42707E-05 | 0 | 2.87819E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4159 | ambiguous | 0.4604 | ambiguous | -2.134 | Highly Destabilizing | 0.334 | N | 0.64 | neutral | N | 0.492668455 | None | None | N |
V/C | 0.734 | likely_pathogenic | 0.7557 | pathogenic | -1.952 | Destabilizing | 0.982 | D | 0.761 | deleterious | None | None | None | None | N |
V/D | 0.8768 | likely_pathogenic | 0.9006 | pathogenic | -2.417 | Highly Destabilizing | 0.826 | D | 0.839 | deleterious | None | None | None | None | N |
V/E | 0.8119 | likely_pathogenic | 0.8425 | pathogenic | -2.189 | Highly Destabilizing | 0.781 | D | 0.827 | deleterious | N | 0.504696323 | None | None | N |
V/F | 0.1694 | likely_benign | 0.2014 | benign | -1.286 | Destabilizing | 0.539 | D | 0.782 | deleterious | None | None | None | None | N |
V/G | 0.5848 | likely_pathogenic | 0.6406 | pathogenic | -2.678 | Highly Destabilizing | 0.781 | D | 0.847 | deleterious | N | 0.504696323 | None | None | N |
V/H | 0.8241 | likely_pathogenic | 0.8582 | pathogenic | -2.348 | Highly Destabilizing | 0.982 | D | 0.83 | deleterious | None | None | None | None | N |
V/I | 0.0615 | likely_benign | 0.0581 | benign | -0.613 | Destabilizing | 0.002 | N | 0.245 | neutral | N | 0.473892945 | None | None | N |
V/K | 0.805 | likely_pathogenic | 0.8307 | pathogenic | -1.637 | Destabilizing | 0.826 | D | 0.829 | deleterious | None | None | None | None | N |
V/L | 0.098 | likely_benign | 0.0925 | benign | -0.613 | Destabilizing | 0.002 | N | 0.333 | neutral | N | 0.380291271 | None | None | N |
V/M | 0.1386 | likely_benign | 0.1455 | benign | -0.893 | Destabilizing | 0.539 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/N | 0.6776 | likely_pathogenic | 0.6984 | pathogenic | -1.981 | Destabilizing | 0.935 | D | 0.847 | deleterious | None | None | None | None | N |
V/P | 0.8583 | likely_pathogenic | 0.8972 | pathogenic | -1.094 | Destabilizing | 0.935 | D | 0.802 | deleterious | None | None | None | None | N |
V/Q | 0.7368 | likely_pathogenic | 0.7708 | pathogenic | -1.802 | Destabilizing | 0.935 | D | 0.823 | deleterious | None | None | None | None | N |
V/R | 0.7249 | likely_pathogenic | 0.7529 | pathogenic | -1.548 | Destabilizing | 0.826 | D | 0.842 | deleterious | None | None | None | None | N |
V/S | 0.587 | likely_pathogenic | 0.6263 | pathogenic | -2.683 | Highly Destabilizing | 0.826 | D | 0.828 | deleterious | None | None | None | None | N |
V/T | 0.4493 | ambiguous | 0.4821 | ambiguous | -2.3 | Highly Destabilizing | 0.399 | N | 0.683 | prob.neutral | None | None | None | None | N |
V/W | 0.8028 | likely_pathogenic | 0.8488 | pathogenic | -1.698 | Destabilizing | 0.982 | D | 0.817 | deleterious | None | None | None | None | N |
V/Y | 0.6157 | likely_pathogenic | 0.6836 | pathogenic | -1.346 | Destabilizing | 0.826 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.