Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5632 | 17119;17120;17121 | chr2:178732075;178732074;178732073 | chr2:179596802;179596801;179596800 |
N2AB | 5315 | 16168;16169;16170 | chr2:178732075;178732074;178732073 | chr2:179596802;179596801;179596800 |
N2A | 4388 | 13387;13388;13389 | chr2:178732075;178732074;178732073 | chr2:179596802;179596801;179596800 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/R | None | None | 0.863 | N | 0.493 | 0.374 | 0.812764335004 | gnomAD-4.0.0 | 6.88696E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0453E-07 | 0 | 0 |
I/T | rs727504971 | None | 0.003 | N | 0.179 | 0.258 | 0.659973416392 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs727504971 | None | 0.003 | N | 0.179 | 0.258 | 0.659973416392 | gnomAD-4.0.0 | 1.87008E-06 | None | None | None | None | N | None | 2.67709E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.52101E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1729 | likely_benign | 0.1392 | benign | -1.417 | Destabilizing | 0.176 | N | 0.338 | neutral | None | None | None | None | N |
I/C | 0.6306 | likely_pathogenic | 0.5889 | pathogenic | -0.952 | Destabilizing | 0.981 | D | 0.422 | neutral | None | None | None | None | N |
I/D | 0.495 | ambiguous | 0.4329 | ambiguous | -0.336 | Destabilizing | 0.704 | D | 0.5 | neutral | None | None | None | None | N |
I/E | 0.36 | ambiguous | 0.3017 | benign | -0.304 | Destabilizing | 0.704 | D | 0.505 | neutral | None | None | None | None | N |
I/F | 0.1194 | likely_benign | 0.111 | benign | -0.832 | Destabilizing | 0.944 | D | 0.381 | neutral | None | None | None | None | N |
I/G | 0.524 | ambiguous | 0.4696 | ambiguous | -1.757 | Destabilizing | 0.704 | D | 0.49 | neutral | None | None | None | None | N |
I/H | 0.3181 | likely_benign | 0.2734 | benign | -0.927 | Destabilizing | 0.981 | D | 0.465 | neutral | None | None | None | None | N |
I/K | 0.217 | likely_benign | 0.1892 | benign | -0.823 | Destabilizing | 0.642 | D | 0.498 | neutral | N | 0.468101202 | None | None | N |
I/L | 0.1042 | likely_benign | 0.1035 | benign | -0.559 | Destabilizing | 0.139 | N | 0.262 | neutral | N | 0.48678575 | None | None | N |
I/M | 0.0779 | likely_benign | 0.0743 | benign | -0.531 | Destabilizing | 0.975 | D | 0.397 | neutral | D | 0.531923394 | None | None | N |
I/N | 0.1883 | likely_benign | 0.1613 | benign | -0.697 | Destabilizing | 0.704 | D | 0.489 | neutral | None | None | None | None | N |
I/P | 0.753 | likely_pathogenic | 0.7474 | pathogenic | -0.813 | Destabilizing | 0.944 | D | 0.495 | neutral | None | None | None | None | N |
I/Q | 0.2778 | likely_benign | 0.2388 | benign | -0.791 | Destabilizing | 0.944 | D | 0.501 | neutral | None | None | None | None | N |
I/R | 0.1524 | likely_benign | 0.1357 | benign | -0.375 | Destabilizing | 0.863 | D | 0.493 | neutral | N | 0.486612391 | None | None | N |
I/S | 0.1749 | likely_benign | 0.1452 | benign | -1.427 | Destabilizing | 0.037 | N | 0.189 | neutral | None | None | None | None | N |
I/T | 0.0797 | likely_benign | 0.0684 | benign | -1.27 | Destabilizing | 0.003 | N | 0.179 | neutral | N | 0.401838924 | None | None | N |
I/V | 0.0746 | likely_benign | 0.0701 | benign | -0.813 | Destabilizing | 0.139 | N | 0.267 | neutral | N | 0.471971013 | None | None | N |
I/W | 0.5886 | likely_pathogenic | 0.571 | pathogenic | -0.894 | Destabilizing | 0.995 | D | 0.504 | neutral | None | None | None | None | N |
I/Y | 0.3669 | ambiguous | 0.3484 | ambiguous | -0.651 | Destabilizing | 0.981 | D | 0.439 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.