Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5633 | 17122;17123;17124 | chr2:178732072;178732071;178732070 | chr2:179596799;179596798;179596797 |
N2AB | 5316 | 16171;16172;16173 | chr2:178732072;178732071;178732070 | chr2:179596799;179596798;179596797 |
N2A | 4389 | 13390;13391;13392 | chr2:178732072;178732071;178732070 | chr2:179596799;179596798;179596797 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | N | 0.734 | 0.318 | 0.644234019813 | gnomAD-4.0.0 | 1.61996E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.8948E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5142 | ambiguous | 0.5964 | pathogenic | -2.068 | Highly Destabilizing | 0.999 | D | 0.778 | deleterious | N | 0.515531737 | None | None | N |
V/C | 0.9001 | likely_pathogenic | 0.9247 | pathogenic | -1.83 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/D | 0.9805 | likely_pathogenic | 0.9886 | pathogenic | -2.398 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.546259745 | None | None | N |
V/E | 0.9391 | likely_pathogenic | 0.9587 | pathogenic | -2.26 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
V/F | 0.6746 | likely_pathogenic | 0.7522 | pathogenic | -1.354 | Destabilizing | 1.0 | D | 0.903 | deleterious | D | 0.545499277 | None | None | N |
V/G | 0.7053 | likely_pathogenic | 0.7771 | pathogenic | -2.496 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.546259745 | None | None | N |
V/H | 0.9813 | likely_pathogenic | 0.9889 | pathogenic | -2.033 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/I | 0.0826 | likely_benign | 0.0859 | benign | -0.91 | Destabilizing | 0.997 | D | 0.734 | prob.delet. | N | 0.512697341 | None | None | N |
V/K | 0.9603 | likely_pathogenic | 0.9744 | pathogenic | -1.66 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
V/L | 0.4738 | ambiguous | 0.532 | ambiguous | -0.91 | Destabilizing | 0.997 | D | 0.771 | deleterious | N | 0.517733783 | None | None | N |
V/M | 0.4238 | ambiguous | 0.5147 | ambiguous | -1.071 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/N | 0.9182 | likely_pathogenic | 0.9479 | pathogenic | -1.81 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/P | 0.9209 | likely_pathogenic | 0.9472 | pathogenic | -1.268 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/Q | 0.9261 | likely_pathogenic | 0.9521 | pathogenic | -1.807 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
V/R | 0.9351 | likely_pathogenic | 0.9569 | pathogenic | -1.337 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
V/S | 0.7212 | likely_pathogenic | 0.7901 | pathogenic | -2.421 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/T | 0.5773 | likely_pathogenic | 0.6436 | pathogenic | -2.161 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
V/W | 0.987 | likely_pathogenic | 0.9922 | pathogenic | -1.68 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/Y | 0.9588 | likely_pathogenic | 0.9747 | pathogenic | -1.365 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.