Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5638 | 17137;17138;17139 | chr2:178731963;178731962;178731961 | chr2:179596690;179596689;179596688 |
N2AB | 5321 | 16186;16187;16188 | chr2:178731963;178731962;178731961 | chr2:179596690;179596689;179596688 |
N2A | 4394 | 13405;13406;13407 | chr2:178731963;178731962;178731961 | chr2:179596690;179596689;179596688 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/N | rs777950405 | -0.192 | 0.642 | N | 0.458 | 0.259 | 0.405560941015 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.34E-05 | None | 0 | 0 | 0 |
Y/N | rs777950405 | -0.192 | 0.642 | N | 0.458 | 0.259 | 0.405560941015 | gnomAD-4.0.0 | 1.61146E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44504E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.2102 | likely_benign | 0.2219 | benign | -1.104 | Destabilizing | 0.176 | N | 0.282 | neutral | None | None | None | None | N |
Y/C | 0.0788 | likely_benign | 0.0854 | benign | -0.26 | Destabilizing | 0.013 | N | 0.291 | neutral | N | 0.489017978 | None | None | N |
Y/D | 0.164 | likely_benign | 0.1657 | benign | 0.674 | Stabilizing | 0.473 | N | 0.441 | neutral | N | 0.48033978 | None | None | N |
Y/E | 0.3307 | likely_benign | 0.3364 | benign | 0.703 | Stabilizing | 0.031 | N | 0.311 | neutral | None | None | None | None | N |
Y/F | 0.0824 | likely_benign | 0.0805 | benign | -0.335 | Destabilizing | 0.784 | D | 0.394 | neutral | N | 0.465949118 | None | None | N |
Y/G | 0.2508 | likely_benign | 0.2554 | benign | -1.339 | Destabilizing | 0.495 | N | 0.405 | neutral | None | None | None | None | N |
Y/H | 0.0887 | likely_benign | 0.0966 | benign | 0.08 | Stabilizing | 0.975 | D | 0.456 | neutral | N | 0.462100736 | None | None | N |
Y/I | 0.1841 | likely_benign | 0.1951 | benign | -0.464 | Destabilizing | 0.704 | D | 0.501 | neutral | None | None | None | None | N |
Y/K | 0.3001 | likely_benign | 0.3264 | benign | -0.219 | Destabilizing | 0.704 | D | 0.429 | neutral | None | None | None | None | N |
Y/L | 0.2508 | likely_benign | 0.2696 | benign | -0.464 | Destabilizing | 0.329 | N | 0.369 | neutral | None | None | None | None | N |
Y/M | 0.3925 | ambiguous | 0.4027 | ambiguous | -0.385 | Destabilizing | 0.981 | D | 0.437 | neutral | None | None | None | None | N |
Y/N | 0.1109 | likely_benign | 0.114 | benign | -0.546 | Destabilizing | 0.642 | D | 0.458 | neutral | N | 0.453134536 | None | None | N |
Y/P | 0.8837 | likely_pathogenic | 0.8902 | pathogenic | -0.662 | Destabilizing | 0.944 | D | 0.507 | neutral | None | None | None | None | N |
Y/Q | 0.216 | likely_benign | 0.2304 | benign | -0.436 | Destabilizing | 0.704 | D | 0.493 | neutral | None | None | None | None | N |
Y/R | 0.1607 | likely_benign | 0.1771 | benign | 0.071 | Stabilizing | 0.704 | D | 0.517 | neutral | None | None | None | None | N |
Y/S | 0.0898 | likely_benign | 0.0938 | benign | -1.036 | Destabilizing | 0.029 | N | 0.277 | neutral | N | 0.374423036 | None | None | N |
Y/T | 0.1549 | likely_benign | 0.1716 | benign | -0.915 | Destabilizing | 0.031 | N | 0.298 | neutral | None | None | None | None | N |
Y/V | 0.1405 | likely_benign | 0.1513 | benign | -0.662 | Destabilizing | 0.329 | N | 0.402 | neutral | None | None | None | None | N |
Y/W | 0.3381 | likely_benign | 0.3327 | benign | -0.246 | Destabilizing | 0.995 | D | 0.459 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.