Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5640 | 17143;17144;17145 | chr2:178731957;178731956;178731955 | chr2:179596684;179596683;179596682 |
N2AB | 5323 | 16192;16193;16194 | chr2:178731957;178731956;178731955 | chr2:179596684;179596683;179596682 |
N2A | 4396 | 13411;13412;13413 | chr2:178731957;178731956;178731955 | chr2:179596684;179596683;179596682 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs2080609627 | None | None | N | 0.075 | 0.116 | 0.124217242631 | gnomAD-4.0.0 | 5.50119E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.23117E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.075 | likely_benign | 0.0802 | benign | -0.841 | Destabilizing | 0.008 | N | 0.145 | neutral | N | 0.504925141 | None | None | I |
T/C | 0.2785 | likely_benign | 0.309 | benign | -0.43 | Destabilizing | 0.001 | N | 0.183 | neutral | None | None | None | None | I |
T/D | 0.283 | likely_benign | 0.3061 | benign | -0.009 | Destabilizing | 0.22 | N | 0.289 | neutral | None | None | None | None | I |
T/E | 0.175 | likely_benign | 0.1909 | benign | 0.03 | Stabilizing | 0.055 | N | 0.302 | neutral | None | None | None | None | I |
T/F | 0.1678 | likely_benign | 0.1878 | benign | -0.777 | Destabilizing | 0.497 | N | 0.484 | neutral | None | None | None | None | I |
T/G | 0.1934 | likely_benign | 0.2057 | benign | -1.127 | Destabilizing | 0.055 | N | 0.227 | neutral | None | None | None | None | I |
T/H | 0.1733 | likely_benign | 0.1928 | benign | -1.195 | Destabilizing | 0.667 | D | 0.372 | neutral | None | None | None | None | I |
T/I | 0.0913 | likely_benign | 0.104 | benign | -0.156 | Destabilizing | 0.042 | N | 0.279 | neutral | N | 0.439988228 | None | None | I |
T/K | 0.1138 | likely_benign | 0.1275 | benign | -0.61 | Destabilizing | None | N | 0.113 | neutral | None | None | None | None | I |
T/L | 0.0671 | likely_benign | 0.0705 | benign | -0.156 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | I |
T/M | 0.074 | likely_benign | 0.0805 | benign | -0.072 | Destabilizing | 0.497 | N | 0.317 | neutral | None | None | None | None | I |
T/N | 0.1075 | likely_benign | 0.1146 | benign | -0.63 | Destabilizing | 0.096 | N | 0.113 | neutral | N | 0.505618574 | None | None | I |
T/P | 0.1223 | likely_benign | 0.1405 | benign | -0.352 | Destabilizing | 0.301 | N | 0.329 | neutral | N | 0.455415852 | None | None | I |
T/Q | 0.1318 | likely_benign | 0.1454 | benign | -0.677 | Destabilizing | 0.22 | N | 0.329 | neutral | None | None | None | None | I |
T/R | 0.085 | likely_benign | 0.0967 | benign | -0.407 | Destabilizing | 0.004 | N | 0.182 | neutral | None | None | None | None | I |
T/S | 0.091 | likely_benign | 0.0941 | benign | -0.952 | Destabilizing | None | N | 0.075 | neutral | N | 0.47933605 | None | None | I |
T/V | 0.0905 | likely_benign | 0.0978 | benign | -0.352 | Destabilizing | None | N | 0.058 | neutral | None | None | None | None | I |
T/W | 0.3942 | ambiguous | 0.4302 | ambiguous | -0.76 | Destabilizing | 0.958 | D | 0.372 | neutral | None | None | None | None | I |
T/Y | 0.1882 | likely_benign | 0.2042 | benign | -0.516 | Destabilizing | 0.667 | D | 0.491 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.