Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5642 | 17149;17150;17151 | chr2:178731951;178731950;178731949 | chr2:179596678;179596677;179596676 |
N2AB | 5325 | 16198;16199;16200 | chr2:178731951;178731950;178731949 | chr2:179596678;179596677;179596676 |
N2A | 4398 | 13417;13418;13419 | chr2:178731951;178731950;178731949 | chr2:179596678;179596677;179596676 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs2080608666 | None | 0.165 | D | 0.311 | 0.07 | 0.263612267334 | gnomAD-4.0.0 | 6.86864E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02997E-07 | 0 | 0 |
E/K | rs1448901680 | 0.247 | 0.001 | N | 0.159 | 0.184 | 0.270447802918 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0822 | likely_benign | 0.09 | benign | -0.544 | Destabilizing | 0.003 | N | 0.145 | neutral | N | 0.509142534 | None | None | I |
E/C | 0.6368 | likely_pathogenic | 0.7118 | pathogenic | -0.364 | Destabilizing | 0.981 | D | 0.315 | neutral | None | None | None | None | I |
E/D | 0.1312 | likely_benign | 0.1344 | benign | -0.664 | Destabilizing | 0.165 | N | 0.311 | neutral | D | 0.53479034 | None | None | I |
E/F | 0.5661 | likely_pathogenic | 0.6196 | pathogenic | 0.311 | Stabilizing | 0.932 | D | 0.345 | neutral | None | None | None | None | I |
E/G | 0.1083 | likely_benign | 0.1263 | benign | -0.894 | Destabilizing | 0.324 | N | 0.395 | neutral | D | 0.524189345 | None | None | I |
E/H | 0.324 | likely_benign | 0.3755 | ambiguous | 0.414 | Stabilizing | 0.818 | D | 0.343 | neutral | None | None | None | None | I |
E/I | 0.2029 | likely_benign | 0.2415 | benign | 0.406 | Stabilizing | 0.69 | D | 0.366 | neutral | None | None | None | None | I |
E/K | 0.0992 | likely_benign | 0.1195 | benign | 0.003 | Stabilizing | 0.001 | N | 0.159 | neutral | N | 0.469237352 | None | None | I |
E/L | 0.2284 | likely_benign | 0.2713 | benign | 0.406 | Stabilizing | 0.388 | N | 0.431 | neutral | None | None | None | None | I |
E/M | 0.257 | likely_benign | 0.3054 | benign | 0.526 | Stabilizing | 0.932 | D | 0.317 | neutral | None | None | None | None | I |
E/N | 0.1787 | likely_benign | 0.1997 | benign | -0.731 | Destabilizing | 0.388 | N | 0.33 | neutral | None | None | None | None | I |
E/P | 0.217 | likely_benign | 0.2205 | benign | 0.11 | Stabilizing | 0.001 | N | 0.138 | neutral | None | None | None | None | I |
E/Q | 0.0968 | likely_benign | 0.1109 | benign | -0.571 | Destabilizing | 0.193 | N | 0.351 | neutral | N | 0.496482668 | None | None | I |
E/R | 0.1681 | likely_benign | 0.1991 | benign | 0.409 | Stabilizing | 0.241 | N | 0.333 | neutral | None | None | None | None | I |
E/S | 0.1355 | likely_benign | 0.1498 | benign | -0.979 | Destabilizing | 0.116 | N | 0.289 | neutral | None | None | None | None | I |
E/T | 0.1224 | likely_benign | 0.1382 | benign | -0.663 | Destabilizing | 0.008 | N | 0.166 | neutral | None | None | None | None | I |
E/V | 0.1195 | likely_benign | 0.138 | benign | 0.11 | Stabilizing | 0.324 | N | 0.415 | neutral | N | 0.488305902 | None | None | I |
E/W | 0.7816 | likely_pathogenic | 0.8277 | pathogenic | 0.673 | Stabilizing | 0.981 | D | 0.353 | neutral | None | None | None | None | I |
E/Y | 0.403 | ambiguous | 0.4647 | ambiguous | 0.624 | Stabilizing | 0.932 | D | 0.343 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.