Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5643 | 17152;17153;17154 | chr2:178731948;178731947;178731946 | chr2:179596675;179596674;179596673 |
N2AB | 5326 | 16201;16202;16203 | chr2:178731948;178731947;178731946 | chr2:179596675;179596674;179596673 |
N2A | 4399 | 13420;13421;13422 | chr2:178731948;178731947;178731946 | chr2:179596675;179596674;179596673 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.03 | N | 0.126 | 0.23 | 0.0666544352282 | gnomAD-4.0.0 | 6.86816E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02931E-07 | 0 | 0 |
F/V | None | None | 0.828 | N | 0.519 | 0.224 | 0.43046518545 | gnomAD-4.0.0 | 6.86816E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02931E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8256 | likely_pathogenic | 0.8162 | pathogenic | -2.467 | Highly Destabilizing | 0.927 | D | 0.516 | neutral | None | None | None | None | I |
F/C | 0.5369 | ambiguous | 0.585 | pathogenic | -1.44 | Destabilizing | 0.999 | D | 0.559 | neutral | N | 0.513755268 | None | None | I |
F/D | 0.9632 | likely_pathogenic | 0.9536 | pathogenic | -1.984 | Destabilizing | 0.995 | D | 0.645 | neutral | None | None | None | None | I |
F/E | 0.9622 | likely_pathogenic | 0.9511 | pathogenic | -1.817 | Destabilizing | 0.995 | D | 0.656 | neutral | None | None | None | None | I |
F/G | 0.9156 | likely_pathogenic | 0.9073 | pathogenic | -2.883 | Highly Destabilizing | 0.984 | D | 0.608 | neutral | None | None | None | None | I |
F/H | 0.9107 | likely_pathogenic | 0.907 | pathogenic | -1.25 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | I |
F/I | 0.2678 | likely_benign | 0.3077 | benign | -1.146 | Destabilizing | 0.921 | D | 0.412 | neutral | N | 0.443239177 | None | None | I |
F/K | 0.9733 | likely_pathogenic | 0.9671 | pathogenic | -1.476 | Destabilizing | 0.984 | D | 0.649 | neutral | None | None | None | None | I |
F/L | 0.7324 | likely_pathogenic | 0.7622 | pathogenic | -1.146 | Destabilizing | 0.03 | N | 0.126 | neutral | N | 0.34901672 | None | None | I |
F/M | 0.4935 | ambiguous | 0.5107 | ambiguous | -0.892 | Destabilizing | 0.991 | D | 0.57 | neutral | None | None | None | None | I |
F/N | 0.8811 | likely_pathogenic | 0.8777 | pathogenic | -1.724 | Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | I |
F/P | 0.8808 | likely_pathogenic | 0.888 | pathogenic | -1.59 | Destabilizing | 0.088 | N | 0.443 | neutral | None | None | None | None | I |
F/Q | 0.9423 | likely_pathogenic | 0.9359 | pathogenic | -1.724 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | I |
F/R | 0.9528 | likely_pathogenic | 0.9487 | pathogenic | -0.985 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | I |
F/S | 0.8565 | likely_pathogenic | 0.8552 | pathogenic | -2.504 | Highly Destabilizing | 0.979 | D | 0.587 | neutral | N | 0.446260839 | None | None | I |
F/T | 0.8549 | likely_pathogenic | 0.8488 | pathogenic | -2.23 | Highly Destabilizing | 0.984 | D | 0.568 | neutral | None | None | None | None | I |
F/V | 0.3474 | ambiguous | 0.3809 | ambiguous | -1.59 | Destabilizing | 0.828 | D | 0.519 | neutral | N | 0.445740764 | None | None | I |
F/W | 0.7173 | likely_pathogenic | 0.7145 | pathogenic | -0.172 | Destabilizing | 0.088 | N | 0.295 | neutral | None | None | None | None | I |
F/Y | 0.3453 | ambiguous | 0.3584 | ambiguous | -0.5 | Destabilizing | 0.959 | D | 0.467 | neutral | N | 0.513408551 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.