Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5644 | 17155;17156;17157 | chr2:178731945;178731944;178731943 | chr2:179596672;179596671;179596670 |
N2AB | 5327 | 16204;16205;16206 | chr2:178731945;178731944;178731943 | chr2:179596672;179596671;179596670 |
N2A | 4400 | 13423;13424;13425 | chr2:178731945;178731944;178731943 | chr2:179596672;179596671;179596670 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.001 | N | 0.135 | 0.124 | 0.253726318573 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1676 | likely_benign | 0.1584 | benign | 0.042 | Stabilizing | 0.025 | N | 0.249 | neutral | None | None | None | None | I |
K/C | 0.4358 | ambiguous | 0.4544 | ambiguous | -0.44 | Destabilizing | 0.958 | D | 0.312 | neutral | None | None | None | None | I |
K/D | 0.2554 | likely_benign | 0.2487 | benign | -0.341 | Destabilizing | 0.055 | N | 0.281 | neutral | None | None | None | None | I |
K/E | 0.0811 | likely_benign | 0.0783 | benign | -0.339 | Destabilizing | None | N | 0.059 | neutral | N | 0.394225092 | None | None | I |
K/F | 0.4608 | ambiguous | 0.4784 | ambiguous | -0.264 | Destabilizing | 0.667 | D | 0.405 | neutral | None | None | None | None | I |
K/G | 0.2281 | likely_benign | 0.2294 | benign | -0.101 | Destabilizing | 0.104 | N | 0.305 | neutral | None | None | None | None | I |
K/H | 0.1596 | likely_benign | 0.1689 | benign | -0.19 | Destabilizing | 0.001 | N | 0.23 | neutral | None | None | None | None | I |
K/I | 0.1846 | likely_benign | 0.1891 | benign | 0.339 | Stabilizing | 0.22 | N | 0.471 | neutral | None | None | None | None | I |
K/L | 0.1596 | likely_benign | 0.1562 | benign | 0.339 | Stabilizing | 0.104 | N | 0.339 | neutral | None | None | None | None | I |
K/M | 0.1421 | likely_benign | 0.1429 | benign | -0.155 | Destabilizing | 0.602 | D | 0.303 | neutral | N | 0.492735861 | None | None | I |
K/N | 0.1814 | likely_benign | 0.1803 | benign | -0.007 | Destabilizing | 0.001 | N | 0.111 | neutral | N | 0.500584553 | None | None | I |
K/P | 0.2929 | likely_benign | 0.2608 | benign | 0.264 | Stabilizing | 0.364 | N | 0.438 | neutral | None | None | None | None | I |
K/Q | 0.0744 | likely_benign | 0.0735 | benign | -0.115 | Destabilizing | None | N | 0.109 | neutral | N | 0.442440327 | None | None | I |
K/R | 0.0781 | likely_benign | 0.0816 | benign | -0.079 | Destabilizing | 0.001 | N | 0.135 | neutral | N | 0.431588615 | None | None | I |
K/S | 0.1677 | likely_benign | 0.1627 | benign | -0.324 | Destabilizing | 0.005 | N | 0.104 | neutral | None | None | None | None | I |
K/T | 0.0974 | likely_benign | 0.093 | benign | -0.202 | Destabilizing | 0.001 | N | 0.104 | neutral | N | 0.447347501 | None | None | I |
K/V | 0.1733 | likely_benign | 0.1721 | benign | 0.264 | Stabilizing | 0.104 | N | 0.417 | neutral | None | None | None | None | I |
K/W | 0.5262 | ambiguous | 0.5716 | pathogenic | -0.394 | Destabilizing | 0.958 | D | 0.309 | neutral | None | None | None | None | I |
K/Y | 0.3415 | ambiguous | 0.3589 | ambiguous | -0.04 | Destabilizing | 0.22 | N | 0.44 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.