Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5646 | 17161;17162;17163 | chr2:178731939;178731938;178731937 | chr2:179596666;179596665;179596664 |
N2AB | 5329 | 16210;16211;16212 | chr2:178731939;178731938;178731937 | chr2:179596666;179596665;179596664 |
N2A | 4402 | 13429;13430;13431 | chr2:178731939;178731938;178731937 | chr2:179596666;179596665;179596664 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs753025325 | -0.982 | None | N | 0.075 | 0.128 | 0.119812018005 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
I/V | rs753025325 | -0.982 | None | N | 0.075 | 0.128 | 0.119812018005 | gnomAD-4.0.0 | 2.05815E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5264E-05 | None | 0 | 0 | 1.80382E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1007 | likely_benign | 0.1131 | benign | -1.651 | Destabilizing | None | N | 0.125 | neutral | None | None | None | None | N |
I/C | 0.4989 | ambiguous | 0.5573 | ambiguous | -1.009 | Destabilizing | 0.245 | N | 0.353 | neutral | None | None | None | None | N |
I/D | 0.4223 | ambiguous | 0.4883 | ambiguous | -1.27 | Destabilizing | 0.085 | N | 0.466 | neutral | None | None | None | None | N |
I/E | 0.2541 | likely_benign | 0.2842 | benign | -1.228 | Destabilizing | 0.018 | N | 0.352 | neutral | None | None | None | None | N |
I/F | 0.12 | likely_benign | 0.1405 | benign | -1.055 | Destabilizing | 0.017 | N | 0.313 | neutral | N | 0.499197687 | None | None | N |
I/G | 0.3456 | ambiguous | 0.4076 | ambiguous | -2.011 | Highly Destabilizing | 0.009 | N | 0.318 | neutral | None | None | None | None | N |
I/H | 0.3337 | likely_benign | 0.3885 | ambiguous | -1.287 | Destabilizing | 0.245 | N | 0.421 | neutral | None | None | None | None | N |
I/K | 0.178 | likely_benign | 0.196 | benign | -1.289 | Destabilizing | None | N | 0.281 | neutral | None | None | None | None | N |
I/L | 0.08 | likely_benign | 0.0847 | benign | -0.716 | Destabilizing | None | N | 0.053 | neutral | N | 0.427006727 | None | None | N |
I/M | 0.0624 | likely_benign | 0.063 | benign | -0.597 | Destabilizing | 0.001 | N | 0.137 | neutral | N | 0.450905094 | None | None | N |
I/N | 0.1874 | likely_benign | 0.2206 | benign | -1.169 | Destabilizing | 0.033 | N | 0.483 | neutral | N | 0.493791867 | None | None | N |
I/P | 0.6334 | likely_pathogenic | 0.7451 | pathogenic | -0.997 | Destabilizing | 0.085 | N | 0.491 | neutral | None | None | None | None | N |
I/Q | 0.2007 | likely_benign | 0.2218 | benign | -1.269 | Destabilizing | 0.044 | N | 0.471 | neutral | None | None | None | None | N |
I/R | 0.1328 | likely_benign | 0.1498 | benign | -0.766 | Destabilizing | None | N | 0.323 | neutral | None | None | None | None | N |
I/S | 0.1426 | likely_benign | 0.1614 | benign | -1.749 | Destabilizing | 0.007 | N | 0.289 | neutral | N | 0.455926912 | None | None | N |
I/T | 0.069 | likely_benign | 0.0771 | benign | -1.583 | Destabilizing | 0.007 | N | 0.327 | neutral | N | 0.431876616 | None | None | N |
I/V | 0.0555 | likely_benign | 0.0576 | benign | -0.997 | Destabilizing | None | N | 0.075 | neutral | N | 0.386714756 | None | None | N |
I/W | 0.5763 | likely_pathogenic | 0.6641 | pathogenic | -1.203 | Destabilizing | 0.788 | D | 0.414 | neutral | None | None | None | None | N |
I/Y | 0.3952 | ambiguous | 0.4444 | ambiguous | -0.962 | Destabilizing | 0.085 | N | 0.457 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.