Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5650 | 17173;17174;17175 | chr2:178731927;178731926;178731925 | chr2:179596654;179596653;179596652 |
N2AB | 5333 | 16222;16223;16224 | chr2:178731927;178731926;178731925 | chr2:179596654;179596653;179596652 |
N2A | 4406 | 13441;13442;13443 | chr2:178731927;178731926;178731925 | chr2:179596654;179596653;179596652 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1429494735 | None | 0.001 | N | 0.157 | 0.047 | 0.151104730317 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs1429494735 | None | 0.001 | N | 0.157 | 0.047 | 0.151104730317 | gnomAD-4.0.0 | 5.13398E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.59767E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4801 | ambiguous | 0.5145 | ambiguous | -0.358 | Destabilizing | 0.207 | N | 0.326 | neutral | None | None | None | None | I |
K/C | 0.8459 | likely_pathogenic | 0.8606 | pathogenic | -0.514 | Destabilizing | 0.981 | D | 0.511 | neutral | None | None | None | None | I |
K/D | 0.7291 | likely_pathogenic | 0.7291 | pathogenic | -0.06 | Destabilizing | 0.388 | N | 0.315 | neutral | None | None | None | None | I |
K/E | 0.221 | likely_benign | 0.2365 | benign | 0.051 | Stabilizing | 0.193 | N | 0.383 | neutral | N | 0.429440373 | None | None | I |
K/F | 0.9033 | likely_pathogenic | 0.9182 | pathogenic | -0.053 | Destabilizing | 0.818 | D | 0.443 | neutral | None | None | None | None | I |
K/G | 0.5394 | ambiguous | 0.5567 | ambiguous | -0.696 | Destabilizing | 0.002 | N | 0.267 | neutral | None | None | None | None | I |
K/H | 0.4362 | ambiguous | 0.4661 | ambiguous | -0.826 | Destabilizing | 0.818 | D | 0.293 | neutral | None | None | None | None | I |
K/I | 0.6366 | likely_pathogenic | 0.6916 | pathogenic | 0.504 | Stabilizing | 0.818 | D | 0.445 | neutral | None | None | None | None | I |
K/L | 0.5434 | ambiguous | 0.591 | pathogenic | 0.504 | Stabilizing | 0.388 | N | 0.399 | neutral | None | None | None | None | I |
K/M | 0.4315 | ambiguous | 0.479 | ambiguous | 0.087 | Stabilizing | 0.975 | D | 0.289 | neutral | N | 0.456666392 | None | None | I |
K/N | 0.6116 | likely_pathogenic | 0.6335 | pathogenic | -0.406 | Destabilizing | 0.324 | N | 0.327 | neutral | N | 0.453045541 | None | None | I |
K/P | 0.5644 | likely_pathogenic | 0.5871 | pathogenic | 0.247 | Stabilizing | 0.818 | D | 0.305 | neutral | None | None | None | None | I |
K/Q | 0.1527 | likely_benign | 0.1659 | benign | -0.391 | Destabilizing | 0.627 | D | 0.367 | neutral | N | 0.48324036 | None | None | I |
K/R | 0.0805 | likely_benign | 0.0807 | benign | -0.411 | Destabilizing | 0.001 | N | 0.157 | neutral | N | 0.442932532 | None | None | I |
K/S | 0.578 | likely_pathogenic | 0.6121 | pathogenic | -0.948 | Destabilizing | 0.388 | N | 0.334 | neutral | None | None | None | None | I |
K/T | 0.3541 | ambiguous | 0.3956 | ambiguous | -0.639 | Destabilizing | 0.324 | N | 0.318 | neutral | N | 0.487742102 | None | None | I |
K/V | 0.5804 | likely_pathogenic | 0.6369 | pathogenic | 0.247 | Stabilizing | 0.69 | D | 0.372 | neutral | None | None | None | None | I |
K/W | 0.8162 | likely_pathogenic | 0.8361 | pathogenic | -0.023 | Destabilizing | 0.981 | D | 0.577 | neutral | None | None | None | None | I |
K/Y | 0.7852 | likely_pathogenic | 0.8007 | pathogenic | 0.265 | Stabilizing | 0.818 | D | 0.411 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.