Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5651 | 17176;17177;17178 | chr2:178731924;178731923;178731922 | chr2:179596651;179596650;179596649 |
N2AB | 5334 | 16225;16226;16227 | chr2:178731924;178731923;178731922 | chr2:179596651;179596650;179596649 |
N2A | 4407 | 13444;13445;13446 | chr2:178731924;178731923;178731922 | chr2:179596651;179596650;179596649 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.27 | N | 0.461 | 0.273 | 0.343788945184 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4334E-05 | 0 |
E/G | rs1180270942 | -0.304 | 0.001 | N | 0.242 | 0.236 | 0.149567049428 | gnomAD-2.1.1 | 6.37E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.29601E-04 | 0 |
E/G | rs1180270942 | -0.304 | 0.001 | N | 0.242 | 0.236 | 0.149567049428 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1180270942 | -0.304 | 0.001 | N | 0.242 | 0.236 | 0.149567049428 | gnomAD-4.0.0 | 2.56306E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.56917E-05 | 0 | 2.39388E-06 | 0 | 0 |
E/K | rs368458199 | 0.439 | 0.425 | N | 0.358 | 0.296 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs368458199 | 0.439 | 0.425 | N | 0.358 | 0.296 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs368458199 | 0.439 | 0.425 | N | 0.358 | 0.296 | None | gnomAD-4.0.0 | 4.05986E-06 | None | None | None | None | I | None | 6.98714E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2091 | likely_benign | 0.1965 | benign | -0.789 | Destabilizing | 0.27 | N | 0.461 | neutral | N | 0.46897078 | None | None | I |
E/C | 0.9205 | likely_pathogenic | 0.8928 | pathogenic | -0.464 | Destabilizing | 0.995 | D | 0.532 | neutral | None | None | None | None | I |
E/D | 0.089 | likely_benign | 0.0825 | benign | -0.668 | Destabilizing | 0.001 | N | 0.173 | neutral | N | 0.405804736 | None | None | I |
E/F | 0.8694 | likely_pathogenic | 0.8379 | pathogenic | -0.265 | Destabilizing | 0.981 | D | 0.545 | neutral | None | None | None | None | I |
E/G | 0.1397 | likely_benign | 0.1236 | benign | -1.072 | Destabilizing | 0.001 | N | 0.242 | neutral | N | 0.280202501 | None | None | I |
E/H | 0.6886 | likely_pathogenic | 0.6434 | pathogenic | -0.109 | Destabilizing | 0.944 | D | 0.407 | neutral | None | None | None | None | I |
E/I | 0.6497 | likely_pathogenic | 0.6277 | pathogenic | -0.039 | Destabilizing | 0.944 | D | 0.536 | neutral | None | None | None | None | I |
E/K | 0.4212 | ambiguous | 0.3715 | ambiguous | -0.232 | Destabilizing | 0.425 | N | 0.358 | neutral | N | 0.447691431 | None | None | I |
E/L | 0.6512 | likely_pathogenic | 0.6157 | pathogenic | -0.039 | Destabilizing | 0.828 | D | 0.541 | neutral | None | None | None | None | I |
E/M | 0.6607 | likely_pathogenic | 0.6372 | pathogenic | 0.142 | Stabilizing | 0.995 | D | 0.525 | neutral | None | None | None | None | I |
E/N | 0.2496 | likely_benign | 0.2178 | benign | -0.773 | Destabilizing | 0.013 | N | 0.201 | neutral | None | None | None | None | I |
E/P | 0.8047 | likely_pathogenic | 0.7687 | pathogenic | -0.269 | Destabilizing | 0.828 | D | 0.501 | neutral | None | None | None | None | I |
E/Q | 0.2594 | likely_benign | 0.2414 | benign | -0.676 | Destabilizing | 0.784 | D | 0.39 | neutral | N | 0.45290525 | None | None | I |
E/R | 0.5611 | ambiguous | 0.5031 | ambiguous | 0.167 | Stabilizing | 0.828 | D | 0.377 | neutral | None | None | None | None | I |
E/S | 0.2337 | likely_benign | 0.2177 | benign | -0.974 | Destabilizing | 0.495 | N | 0.38 | neutral | None | None | None | None | I |
E/T | 0.3334 | likely_benign | 0.3202 | benign | -0.736 | Destabilizing | 0.704 | D | 0.437 | neutral | None | None | None | None | I |
E/V | 0.4332 | ambiguous | 0.4267 | ambiguous | -0.269 | Destabilizing | 0.784 | D | 0.519 | neutral | N | 0.494002511 | None | None | I |
E/W | 0.9492 | likely_pathogenic | 0.9307 | pathogenic | 0.032 | Stabilizing | 0.995 | D | 0.541 | neutral | None | None | None | None | I |
E/Y | 0.7333 | likely_pathogenic | 0.6824 | pathogenic | -0.008 | Destabilizing | 0.981 | D | 0.531 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.