Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5653 | 17182;17183;17184 | chr2:178731918;178731917;178731916 | chr2:179596645;179596644;179596643 |
N2AB | 5336 | 16231;16232;16233 | chr2:178731918;178731917;178731916 | chr2:179596645;179596644;179596643 |
N2A | 4409 | 13450;13451;13452 | chr2:178731918;178731917;178731916 | chr2:179596645;179596644;179596643 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs267599067 | -0.846 | 1.0 | N | 0.565 | 0.31 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
D/N | rs267599067 | -0.846 | 1.0 | N | 0.565 | 0.31 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/N | rs267599067 | -0.846 | 1.0 | N | 0.565 | 0.31 | None | gnomAD-4.0.0 | 9.91669E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.3247E-06 | 4.39309E-05 | 1.60118E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6242 | likely_pathogenic | 0.6321 | pathogenic | -0.378 | Destabilizing | 0.989 | D | 0.522 | neutral | N | 0.487955533 | None | None | N |
D/C | 0.9535 | likely_pathogenic | 0.9568 | pathogenic | -0.227 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
D/E | 0.4517 | ambiguous | 0.4863 | ambiguous | -0.493 | Destabilizing | 0.543 | D | 0.248 | neutral | N | 0.473890158 | None | None | N |
D/F | 0.9622 | likely_pathogenic | 0.9598 | pathogenic | 0.281 | Stabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
D/G | 0.6492 | likely_pathogenic | 0.6513 | pathogenic | -0.748 | Destabilizing | 0.994 | D | 0.535 | neutral | N | 0.471683229 | None | None | N |
D/H | 0.7565 | likely_pathogenic | 0.7763 | pathogenic | 0.08 | Stabilizing | 1.0 | D | 0.651 | neutral | N | 0.472443697 | None | None | N |
D/I | 0.9044 | likely_pathogenic | 0.9008 | pathogenic | 0.604 | Stabilizing | 0.995 | D | 0.706 | prob.neutral | None | None | None | None | N |
D/K | 0.9002 | likely_pathogenic | 0.9099 | pathogenic | -0.249 | Destabilizing | 0.998 | D | 0.606 | neutral | None | None | None | None | N |
D/L | 0.9092 | likely_pathogenic | 0.9079 | pathogenic | 0.604 | Stabilizing | 0.995 | D | 0.667 | neutral | None | None | None | None | N |
D/M | 0.9608 | likely_pathogenic | 0.9626 | pathogenic | 0.887 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
D/N | 0.2789 | likely_benign | 0.2956 | benign | -0.846 | Destabilizing | 1.0 | D | 0.565 | neutral | N | 0.47129257 | None | None | N |
D/P | 0.8808 | likely_pathogenic | 0.8768 | pathogenic | 0.303 | Stabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
D/Q | 0.8246 | likely_pathogenic | 0.8454 | pathogenic | -0.662 | Destabilizing | 0.998 | D | 0.618 | neutral | None | None | None | None | N |
D/R | 0.8851 | likely_pathogenic | 0.8993 | pathogenic | 0.012 | Stabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
D/S | 0.3966 | ambiguous | 0.4046 | ambiguous | -1.071 | Destabilizing | 0.992 | D | 0.487 | neutral | None | None | None | None | N |
D/T | 0.7 | likely_pathogenic | 0.6946 | pathogenic | -0.757 | Destabilizing | 0.998 | D | 0.606 | neutral | None | None | None | None | N |
D/V | 0.7768 | likely_pathogenic | 0.7663 | pathogenic | 0.303 | Stabilizing | 0.733 | D | 0.427 | neutral | N | 0.492438633 | None | None | N |
D/W | 0.988 | likely_pathogenic | 0.9886 | pathogenic | 0.508 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/Y | 0.75 | likely_pathogenic | 0.7435 | pathogenic | 0.536 | Stabilizing | 1.0 | D | 0.763 | deleterious | N | 0.490547952 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.