Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC565417185;17186;17187 chr2:178731915;178731914;178731913chr2:179596642;179596641;179596640
N2AB533716234;16235;16236 chr2:178731915;178731914;178731913chr2:179596642;179596641;179596640
N2A441013453;13454;13455 chr2:178731915;178731914;178731913chr2:179596642;179596641;179596640
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTC
  • RefSeq wild type template codon: CAG
  • Domain: Ig-40
  • Domain position: 18
  • Structural Position: 28
  • Q(SASA): 0.1273
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/A None None 0.219 N 0.271 0.167 0.395595088485 gnomAD-4.0.0 1.59161E-06 None None None None N None 0 0 None 0 0 None 0 0 2.85884E-06 0 0
V/G rs763581306 -2.867 0.98 N 0.747 0.314 0.801125762009 gnomAD-2.1.1 4.03E-05 None None None None N None 0 0 None 0 0 None 0 None 0 8.91E-05 0
V/G rs763581306 -2.867 0.98 N 0.747 0.314 0.801125762009 gnomAD-4.0.0 3.02406E-05 None None None None N None 0 0 None 0 0 None 0 0 4.57415E-05 0 9.07331E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.2688 likely_benign 0.2577 benign -2.166 Highly Destabilizing 0.219 N 0.271 neutral N 0.437836144 None None N
V/C 0.8391 likely_pathogenic 0.8016 pathogenic -1.607 Destabilizing 1.0 D 0.735 prob.delet. None None None None N
V/D 0.898 likely_pathogenic 0.8946 pathogenic -2.66 Highly Destabilizing 0.997 D 0.821 deleterious N 0.497201132 None None N
V/E 0.8246 likely_pathogenic 0.8223 pathogenic -2.443 Highly Destabilizing 0.998 D 0.781 deleterious None None None None N
V/F 0.4222 ambiguous 0.4271 ambiguous -1.35 Destabilizing 0.994 D 0.811 deleterious N 0.469182149 None None N
V/G 0.5121 ambiguous 0.4881 ambiguous -2.701 Highly Destabilizing 0.98 D 0.747 deleterious N 0.478589898 None None N
V/H 0.9403 likely_pathogenic 0.9411 pathogenic -2.372 Highly Destabilizing 1.0 D 0.781 deleterious None None None None N
V/I 0.0853 likely_benign 0.0911 benign -0.669 Destabilizing 0.911 D 0.593 neutral N 0.504138494 None None N
V/K 0.8754 likely_pathogenic 0.8734 pathogenic -1.892 Destabilizing 0.998 D 0.775 deleterious None None None None N
V/L 0.3365 likely_benign 0.3391 benign -0.669 Destabilizing 0.911 D 0.53 neutral N 0.465041388 None None N
V/M 0.2159 likely_benign 0.2323 benign -0.603 Destabilizing 0.931 D 0.478 neutral None None None None N
V/N 0.7849 likely_pathogenic 0.7892 pathogenic -2.153 Highly Destabilizing 0.999 D 0.814 deleterious None None None None N
V/P 0.9714 likely_pathogenic 0.9698 pathogenic -1.141 Destabilizing 0.998 D 0.8 deleterious None None None None N
V/Q 0.8389 likely_pathogenic 0.8358 pathogenic -2.014 Highly Destabilizing 0.998 D 0.78 deleterious None None None None N
V/R 0.8476 likely_pathogenic 0.8392 pathogenic -1.696 Destabilizing 0.998 D 0.819 deleterious None None None None N
V/S 0.5556 ambiguous 0.5397 ambiguous -2.775 Highly Destabilizing 0.971 D 0.731 prob.delet. None None None None N
V/T 0.3148 likely_benign 0.322 benign -2.407 Highly Destabilizing 0.985 D 0.634 neutral None None None None N
V/W 0.9764 likely_pathogenic 0.9736 pathogenic -1.82 Destabilizing 1.0 D 0.769 deleterious None None None None N
V/Y 0.8837 likely_pathogenic 0.8734 pathogenic -1.446 Destabilizing 0.999 D 0.775 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.