Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5659 | 17200;17201;17202 | chr2:178731900;178731899;178731898 | chr2:179596627;179596626;179596625 |
N2AB | 5342 | 16249;16250;16251 | chr2:178731900;178731899;178731898 | chr2:179596627;179596626;179596625 |
N2A | 4415 | 13468;13469;13470 | chr2:178731900;178731899;178731898 | chr2:179596627;179596626;179596625 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.896 | D | 0.469 | 0.144 | 0.21279746466 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
E/K | rs763708860 | -0.756 | 0.811 | N | 0.519 | 0.275 | 0.32580497728 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs763708860 | -0.756 | 0.811 | N | 0.519 | 0.275 | 0.32580497728 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs763708860 | -0.756 | 0.811 | N | 0.519 | 0.275 | 0.32580497728 | gnomAD-4.0.0 | 3.09866E-06 | None | None | None | None | I | None | 4.00545E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69531E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.191 | likely_benign | 0.2179 | benign | -0.976 | Destabilizing | 0.64 | D | 0.561 | neutral | D | 0.528056369 | None | None | I |
E/C | 0.9009 | likely_pathogenic | 0.9246 | pathogenic | -0.513 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/D | 0.2616 | likely_benign | 0.2959 | benign | -1.206 | Destabilizing | 0.896 | D | 0.469 | neutral | D | 0.530653957 | None | None | I |
E/F | 0.8419 | likely_pathogenic | 0.8718 | pathogenic | -0.512 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/G | 0.2924 | likely_benign | 0.3489 | ambiguous | -1.353 | Destabilizing | 0.026 | N | 0.425 | neutral | N | 0.487493663 | None | None | I |
E/H | 0.4971 | ambiguous | 0.5587 | ambiguous | -0.81 | Destabilizing | 0.988 | D | 0.582 | neutral | None | None | None | None | I |
E/I | 0.4561 | ambiguous | 0.5118 | ambiguous | 0.059 | Stabilizing | 0.976 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/K | 0.1322 | likely_benign | 0.1652 | benign | -0.696 | Destabilizing | 0.811 | D | 0.519 | neutral | N | 0.511316048 | None | None | I |
E/L | 0.5002 | ambiguous | 0.5817 | pathogenic | 0.059 | Stabilizing | 0.976 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/M | 0.5103 | ambiguous | 0.5783 | pathogenic | 0.573 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
E/N | 0.3698 | ambiguous | 0.4331 | ambiguous | -1.136 | Destabilizing | 0.919 | D | 0.547 | neutral | None | None | None | None | I |
E/P | 0.907 | likely_pathogenic | 0.9239 | pathogenic | -0.265 | Destabilizing | 0.996 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/Q | 0.1337 | likely_benign | 0.153 | benign | -1.004 | Destabilizing | 0.437 | N | 0.289 | neutral | N | 0.488305902 | None | None | I |
E/R | 0.258 | likely_benign | 0.301 | benign | -0.474 | Destabilizing | 0.976 | D | 0.569 | neutral | None | None | None | None | I |
E/S | 0.2581 | likely_benign | 0.2937 | benign | -1.516 | Destabilizing | 0.851 | D | 0.499 | neutral | None | None | None | None | I |
E/T | 0.2641 | likely_benign | 0.2991 | benign | -1.197 | Destabilizing | 0.132 | N | 0.382 | neutral | None | None | None | None | I |
E/V | 0.2588 | likely_benign | 0.2976 | benign | -0.265 | Destabilizing | 0.968 | D | 0.677 | prob.neutral | D | 0.523978701 | None | None | I |
E/W | 0.9396 | likely_pathogenic | 0.9532 | pathogenic | -0.291 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/Y | 0.7372 | likely_pathogenic | 0.7919 | pathogenic | -0.253 | Destabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.