Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC565917200;17201;17202 chr2:178731900;178731899;178731898chr2:179596627;179596626;179596625
N2AB534216249;16250;16251 chr2:178731900;178731899;178731898chr2:179596627;179596626;179596625
N2A441513468;13469;13470 chr2:178731900;178731899;178731898chr2:179596627;179596626;179596625
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAG
  • RefSeq wild type template codon: CTC
  • Domain: Ig-40
  • Domain position: 23
  • Structural Position: 34
  • Q(SASA): 0.4424
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/D None None 0.896 D 0.469 0.144 0.21279746466 gnomAD-4.0.0 1.20032E-06 None None None None I None 0 0 None 0 0 None 0 0 0 6.07533E-05 0
E/K rs763708860 -0.756 0.811 N 0.519 0.275 0.32580497728 gnomAD-2.1.1 4.03E-06 None None None None I None 6.46E-05 0 None 0 0 None 0 None 0 0 0
E/K rs763708860 -0.756 0.811 N 0.519 0.275 0.32580497728 gnomAD-3.1.2 1.31E-05 None None None None I None 4.83E-05 0 0 0 0 None 0 0 0 0 0
E/K rs763708860 -0.756 0.811 N 0.519 0.275 0.32580497728 gnomAD-4.0.0 3.09866E-06 None None None None I None 4.00545E-05 0 None 0 0 None 0 0 1.69531E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.191 likely_benign 0.2179 benign -0.976 Destabilizing 0.64 D 0.561 neutral D 0.528056369 None None I
E/C 0.9009 likely_pathogenic 0.9246 pathogenic -0.513 Destabilizing 0.999 D 0.711 prob.delet. None None None None I
E/D 0.2616 likely_benign 0.2959 benign -1.206 Destabilizing 0.896 D 0.469 neutral D 0.530653957 None None I
E/F 0.8419 likely_pathogenic 0.8718 pathogenic -0.512 Destabilizing 0.996 D 0.709 prob.delet. None None None None I
E/G 0.2924 likely_benign 0.3489 ambiguous -1.353 Destabilizing 0.026 N 0.425 neutral N 0.487493663 None None I
E/H 0.4971 ambiguous 0.5587 ambiguous -0.81 Destabilizing 0.988 D 0.582 neutral None None None None I
E/I 0.4561 ambiguous 0.5118 ambiguous 0.059 Stabilizing 0.976 D 0.713 prob.delet. None None None None I
E/K 0.1322 likely_benign 0.1652 benign -0.696 Destabilizing 0.811 D 0.519 neutral N 0.511316048 None None I
E/L 0.5002 ambiguous 0.5817 pathogenic 0.059 Stabilizing 0.976 D 0.685 prob.neutral None None None None I
E/M 0.5103 ambiguous 0.5783 pathogenic 0.573 Stabilizing 0.999 D 0.695 prob.neutral None None None None I
E/N 0.3698 ambiguous 0.4331 ambiguous -1.136 Destabilizing 0.919 D 0.547 neutral None None None None I
E/P 0.907 likely_pathogenic 0.9239 pathogenic -0.265 Destabilizing 0.996 D 0.697 prob.neutral None None None None I
E/Q 0.1337 likely_benign 0.153 benign -1.004 Destabilizing 0.437 N 0.289 neutral N 0.488305902 None None I
E/R 0.258 likely_benign 0.301 benign -0.474 Destabilizing 0.976 D 0.569 neutral None None None None I
E/S 0.2581 likely_benign 0.2937 benign -1.516 Destabilizing 0.851 D 0.499 neutral None None None None I
E/T 0.2641 likely_benign 0.2991 benign -1.197 Destabilizing 0.132 N 0.382 neutral None None None None I
E/V 0.2588 likely_benign 0.2976 benign -0.265 Destabilizing 0.968 D 0.677 prob.neutral D 0.523978701 None None I
E/W 0.9396 likely_pathogenic 0.9532 pathogenic -0.291 Destabilizing 0.999 D 0.697 prob.neutral None None None None I
E/Y 0.7372 likely_pathogenic 0.7919 pathogenic -0.253 Destabilizing 0.996 D 0.705 prob.neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.