Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5660 | 17203;17204;17205 | chr2:178731897;178731896;178731895 | chr2:179596624;179596623;179596622 |
N2AB | 5343 | 16252;16253;16254 | chr2:178731897;178731896;178731895 | chr2:179596624;179596623;179596622 |
N2A | 4416 | 13471;13472;13473 | chr2:178731897;178731896;178731895 | chr2:179596624;179596623;179596622 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.217 | D | 0.292 | 0.328 | 0.469415673434 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3004 | likely_benign | 0.3689 | ambiguous | -1.908 | Destabilizing | 0.994 | D | 0.664 | neutral | N | 0.498936689 | None | None | N |
V/C | 0.9179 | likely_pathogenic | 0.9222 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
V/D | 0.9701 | likely_pathogenic | 0.9801 | pathogenic | -2.708 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/E | 0.9235 | likely_pathogenic | 0.9485 | pathogenic | -2.409 | Highly Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.565334783 | None | None | N |
V/F | 0.3951 | ambiguous | 0.392 | ambiguous | -1.059 | Destabilizing | 0.998 | D | 0.816 | deleterious | None | None | None | None | N |
V/G | 0.5984 | likely_pathogenic | 0.6449 | pathogenic | -2.506 | Highly Destabilizing | 0.999 | D | 0.852 | deleterious | D | 0.557441185 | None | None | N |
V/H | 0.974 | likely_pathogenic | 0.9812 | pathogenic | -2.472 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/I | 0.0937 | likely_benign | 0.1 | benign | -0.191 | Destabilizing | 0.611 | D | 0.24 | neutral | None | None | None | None | N |
V/K | 0.9438 | likely_pathogenic | 0.9636 | pathogenic | -1.429 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
V/L | 0.3036 | likely_benign | 0.3309 | benign | -0.191 | Destabilizing | 0.217 | N | 0.292 | neutral | D | 0.545858861 | None | None | N |
V/M | 0.2804 | likely_benign | 0.3113 | benign | -0.307 | Destabilizing | 0.997 | D | 0.726 | prob.delet. | D | 0.56075221 | None | None | N |
V/N | 0.927 | likely_pathogenic | 0.9471 | pathogenic | -1.991 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/P | 0.941 | likely_pathogenic | 0.9614 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/Q | 0.9339 | likely_pathogenic | 0.9536 | pathogenic | -1.669 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/R | 0.9227 | likely_pathogenic | 0.945 | pathogenic | -1.572 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/S | 0.7653 | likely_pathogenic | 0.8125 | pathogenic | -2.544 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/T | 0.4538 | ambiguous | 0.5266 | ambiguous | -2.087 | Highly Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/W | 0.9669 | likely_pathogenic | 0.9727 | pathogenic | -1.679 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/Y | 0.8841 | likely_pathogenic | 0.8914 | pathogenic | -1.249 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.