Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5661 | 17206;17207;17208 | chr2:178731894;178731893;178731892 | chr2:179596621;179596620;179596619 |
N2AB | 5344 | 16255;16256;16257 | chr2:178731894;178731893;178731892 | chr2:179596621;179596620;179596619 |
N2A | 4417 | 13474;13475;13476 | chr2:178731894;178731893;178731892 | chr2:179596621;179596620;179596619 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.669 | N | 0.286 | 0.141 | 0.250039746154 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
A/V | rs1231169310 | 0.116 | 0.669 | N | 0.267 | 0.165 | 0.419957187557 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
A/V | rs1231169310 | 0.116 | 0.669 | N | 0.267 | 0.165 | 0.419957187557 | gnomAD-4.0.0 | 3.18296E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.8659E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3949 | ambiguous | 0.4378 | ambiguous | -0.464 | Destabilizing | 0.998 | D | 0.356 | neutral | None | None | None | None | N |
A/D | 0.1814 | likely_benign | 0.1901 | benign | -1.184 | Destabilizing | 0.016 | N | 0.311 | neutral | None | None | None | None | N |
A/E | 0.1622 | likely_benign | 0.1817 | benign | -1.134 | Destabilizing | 0.669 | D | 0.323 | neutral | N | 0.469159994 | None | None | N |
A/F | 0.2507 | likely_benign | 0.2815 | benign | -0.729 | Destabilizing | 0.949 | D | 0.393 | neutral | None | None | None | None | N |
A/G | 0.1227 | likely_benign | 0.1326 | benign | -1.112 | Destabilizing | 0.625 | D | 0.311 | neutral | N | 0.495271947 | None | None | N |
A/H | 0.3459 | ambiguous | 0.3705 | ambiguous | -1.346 | Destabilizing | 0.974 | D | 0.362 | neutral | None | None | None | None | N |
A/I | 0.2077 | likely_benign | 0.2438 | benign | -0.018 | Destabilizing | 0.728 | D | 0.336 | neutral | None | None | None | None | N |
A/K | 0.267 | likely_benign | 0.3004 | benign | -1.035 | Destabilizing | 0.842 | D | 0.285 | neutral | None | None | None | None | N |
A/L | 0.1489 | likely_benign | 0.1684 | benign | -0.018 | Destabilizing | 0.007 | N | 0.149 | neutral | None | None | None | None | N |
A/M | 0.1802 | likely_benign | 0.1982 | benign | 0.032 | Stabilizing | 0.949 | D | 0.327 | neutral | None | None | None | None | N |
A/N | 0.2085 | likely_benign | 0.2223 | benign | -0.834 | Destabilizing | 0.067 | N | 0.319 | neutral | None | None | None | None | N |
A/P | 0.8067 | likely_pathogenic | 0.8656 | pathogenic | -0.233 | Destabilizing | 0.966 | D | 0.328 | neutral | N | 0.518610167 | None | None | N |
A/Q | 0.2347 | likely_benign | 0.2509 | benign | -0.872 | Destabilizing | 0.974 | D | 0.323 | neutral | None | None | None | None | N |
A/R | 0.2353 | likely_benign | 0.265 | benign | -0.836 | Destabilizing | 0.974 | D | 0.33 | neutral | None | None | None | None | N |
A/S | 0.0853 | likely_benign | 0.0839 | benign | -1.195 | Destabilizing | 0.062 | N | 0.094 | neutral | N | 0.424158423 | None | None | N |
A/T | 0.0819 | likely_benign | 0.0859 | benign | -1.043 | Destabilizing | 0.669 | D | 0.286 | neutral | N | 0.446592566 | None | None | N |
A/V | 0.1187 | likely_benign | 0.1366 | benign | -0.233 | Destabilizing | 0.669 | D | 0.267 | neutral | N | 0.493578436 | None | None | N |
A/W | 0.5997 | likely_pathogenic | 0.6356 | pathogenic | -1.244 | Destabilizing | 0.998 | D | 0.527 | neutral | None | None | None | None | N |
A/Y | 0.3542 | ambiguous | 0.3923 | ambiguous | -0.744 | Destabilizing | 0.974 | D | 0.379 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.