Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5669 | 17230;17231;17232 | chr2:178731870;178731869;178731868 | chr2:179596597;179596596;179596595 |
N2AB | 5352 | 16279;16280;16281 | chr2:178731870;178731869;178731868 | chr2:179596597;179596596;179596595 |
N2A | 4425 | 13498;13499;13500 | chr2:178731870;178731869;178731868 | chr2:179596597;179596596;179596595 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2080592409 | None | 0.473 | N | 0.543 | 0.302 | 0.455173453901 | gnomAD-4.0.0 | 7.95684E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.38673E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0784 | likely_benign | 0.078 | benign | -0.887 | Destabilizing | 0.01 | N | 0.195 | neutral | N | 0.490581082 | None | None | N |
T/C | 0.3278 | likely_benign | 0.3512 | ambiguous | -0.487 | Destabilizing | 0.995 | D | 0.552 | neutral | None | None | None | None | N |
T/D | 0.354 | ambiguous | 0.364 | ambiguous | -0.626 | Destabilizing | 0.704 | D | 0.515 | neutral | None | None | None | None | N |
T/E | 0.2772 | likely_benign | 0.2874 | benign | -0.502 | Destabilizing | 0.704 | D | 0.512 | neutral | None | None | None | None | N |
T/F | 0.1792 | likely_benign | 0.1963 | benign | -0.597 | Destabilizing | 0.007 | N | 0.48 | neutral | None | None | None | None | N |
T/G | 0.2489 | likely_benign | 0.2479 | benign | -1.257 | Destabilizing | 0.329 | N | 0.487 | neutral | None | None | None | None | N |
T/H | 0.1801 | likely_benign | 0.1882 | benign | -1.362 | Destabilizing | 0.893 | D | 0.553 | neutral | None | None | None | None | N |
T/I | 0.1193 | likely_benign | 0.1354 | benign | 0.053 | Stabilizing | 0.473 | N | 0.543 | neutral | N | 0.489152731 | None | None | N |
T/K | 0.1904 | likely_benign | 0.2082 | benign | -0.629 | Destabilizing | 0.031 | N | 0.335 | neutral | None | None | None | None | N |
T/L | 0.0877 | likely_benign | 0.0933 | benign | 0.053 | Stabilizing | 0.329 | N | 0.479 | neutral | None | None | None | None | N |
T/M | 0.0808 | likely_benign | 0.0869 | benign | 0.081 | Stabilizing | 0.944 | D | 0.563 | neutral | None | None | None | None | N |
T/N | 0.1002 | likely_benign | 0.1023 | benign | -0.968 | Destabilizing | 0.642 | D | 0.497 | neutral | N | 0.49159504 | None | None | N |
T/P | 0.4426 | ambiguous | 0.5268 | ambiguous | -0.227 | Destabilizing | 0.927 | D | 0.563 | neutral | D | 0.534653631 | None | None | N |
T/Q | 0.1741 | likely_benign | 0.1836 | benign | -0.855 | Destabilizing | 0.893 | D | 0.563 | neutral | None | None | None | None | N |
T/R | 0.1434 | likely_benign | 0.1544 | benign | -0.64 | Destabilizing | 0.543 | D | 0.554 | neutral | None | None | None | None | N |
T/S | 0.0852 | likely_benign | 0.0842 | benign | -1.235 | Destabilizing | 0.01 | N | 0.209 | neutral | N | 0.461020514 | None | None | N |
T/V | 0.1123 | likely_benign | 0.1219 | benign | -0.227 | Destabilizing | 0.495 | N | 0.427 | neutral | None | None | None | None | N |
T/W | 0.5129 | ambiguous | 0.529 | ambiguous | -0.694 | Destabilizing | 0.985 | D | 0.55 | neutral | None | None | None | None | N |
T/Y | 0.2033 | likely_benign | 0.2104 | benign | -0.374 | Destabilizing | 0.007 | N | 0.482 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.