Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5670 | 17233;17234;17235 | chr2:178731867;178731866;178731865 | chr2:179596594;179596593;179596592 |
N2AB | 5353 | 16282;16283;16284 | chr2:178731867;178731866;178731865 | chr2:179596594;179596593;179596592 |
N2A | 4426 | 13501;13502;13503 | chr2:178731867;178731866;178731865 | chr2:179596594;179596593;179596592 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/C | rs759141317 | -1.498 | 0.077 | D | 0.701 | 0.624 | 0.877831071711 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
W/C | rs759141317 | -1.498 | 0.077 | D | 0.701 | 0.624 | 0.877831071711 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8585E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.9558 | likely_pathogenic | 0.941 | pathogenic | -2.484 | Highly Destabilizing | 0.939 | D | 0.807 | deleterious | None | None | None | None | N |
W/C | 0.9499 | likely_pathogenic | 0.9296 | pathogenic | -1.15 | Destabilizing | 0.077 | N | 0.701 | prob.neutral | D | 0.65756118 | None | None | N |
W/D | 0.9992 | likely_pathogenic | 0.9988 | pathogenic | -2.969 | Highly Destabilizing | 0.997 | D | 0.856 | deleterious | None | None | None | None | N |
W/E | 0.9989 | likely_pathogenic | 0.9986 | pathogenic | -2.837 | Highly Destabilizing | 0.997 | D | 0.852 | deleterious | None | None | None | None | N |
W/F | 0.3812 | ambiguous | 0.3426 | ambiguous | -1.4 | Destabilizing | 0.046 | N | 0.495 | neutral | None | None | None | None | N |
W/G | 0.939 | likely_pathogenic | 0.9126 | pathogenic | -2.735 | Highly Destabilizing | 0.959 | D | 0.795 | deleterious | D | 0.689630263 | None | None | N |
W/H | 0.9906 | likely_pathogenic | 0.9897 | pathogenic | -1.89 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
W/I | 0.8503 | likely_pathogenic | 0.8339 | pathogenic | -1.543 | Destabilizing | 0.884 | D | 0.824 | deleterious | None | None | None | None | N |
W/K | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -1.99 | Destabilizing | 0.997 | D | 0.848 | deleterious | None | None | None | None | N |
W/L | 0.7289 | likely_pathogenic | 0.7135 | pathogenic | -1.543 | Destabilizing | 0.035 | N | 0.622 | neutral | D | 0.647840625 | None | None | N |
W/M | 0.9253 | likely_pathogenic | 0.909 | pathogenic | -1.062 | Destabilizing | 0.982 | D | 0.787 | deleterious | None | None | None | None | N |
W/N | 0.9973 | likely_pathogenic | 0.9964 | pathogenic | -2.745 | Highly Destabilizing | 0.997 | D | 0.852 | deleterious | None | None | None | None | N |
W/P | 0.9961 | likely_pathogenic | 0.9949 | pathogenic | -1.884 | Destabilizing | 0.997 | D | 0.848 | deleterious | None | None | None | None | N |
W/Q | 0.9984 | likely_pathogenic | 0.998 | pathogenic | -2.512 | Highly Destabilizing | 0.997 | D | 0.823 | deleterious | None | None | None | None | N |
W/R | 0.9977 | likely_pathogenic | 0.9972 | pathogenic | -1.968 | Destabilizing | 0.996 | D | 0.857 | deleterious | D | 0.689832067 | None | None | N |
W/S | 0.9587 | likely_pathogenic | 0.9452 | pathogenic | -2.853 | Highly Destabilizing | 0.988 | D | 0.833 | deleterious | D | 0.689832067 | None | None | N |
W/T | 0.9691 | likely_pathogenic | 0.9586 | pathogenic | -2.642 | Highly Destabilizing | 0.969 | D | 0.803 | deleterious | None | None | None | None | N |
W/V | 0.8132 | likely_pathogenic | 0.7858 | pathogenic | -1.884 | Destabilizing | 0.884 | D | 0.814 | deleterious | None | None | None | None | N |
W/Y | 0.7855 | likely_pathogenic | 0.7703 | pathogenic | -1.201 | Destabilizing | 0.884 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.