Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5675 | 17248;17249;17250 | chr2:178731852;178731851;178731850 | chr2:179596579;179596578;179596577 |
N2AB | 5358 | 16297;16298;16299 | chr2:178731852;178731851;178731850 | chr2:179596579;179596578;179596577 |
N2A | 4431 | 13516;13517;13518 | chr2:178731852;178731851;178731850 | chr2:179596579;179596578;179596577 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1198124023 | -0.584 | 0.625 | N | 0.263 | 0.254 | 0.215869574891 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
T/A | rs1198124023 | -0.584 | 0.625 | N | 0.263 | 0.254 | 0.215869574891 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14594E-04 | 0 |
T/A | rs1198124023 | -0.584 | 0.625 | N | 0.263 | 0.254 | 0.215869574891 | gnomAD-4.0.0 | 6.19715E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 9.88142E-05 | 1.60113E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0666 | likely_benign | 0.0647 | benign | -0.634 | Destabilizing | 0.625 | D | 0.263 | neutral | N | 0.458252354 | None | None | N |
T/C | 0.3209 | likely_benign | 0.323 | benign | -0.389 | Destabilizing | 0.998 | D | 0.386 | neutral | None | None | None | None | N |
T/D | 0.3277 | likely_benign | 0.2965 | benign | 0.463 | Stabilizing | 0.728 | D | 0.357 | neutral | None | None | None | None | N |
T/E | 0.2648 | likely_benign | 0.2415 | benign | 0.445 | Stabilizing | 0.067 | N | 0.22 | neutral | None | None | None | None | N |
T/F | 0.2059 | likely_benign | 0.2052 | benign | -0.936 | Destabilizing | 0.991 | D | 0.421 | neutral | None | None | None | None | N |
T/G | 0.1872 | likely_benign | 0.1788 | benign | -0.834 | Destabilizing | 0.842 | D | 0.399 | neutral | None | None | None | None | N |
T/H | 0.1748 | likely_benign | 0.1673 | benign | -0.981 | Destabilizing | 0.991 | D | 0.413 | neutral | None | None | None | None | N |
T/I | 0.1213 | likely_benign | 0.1245 | benign | -0.21 | Destabilizing | 0.966 | D | 0.365 | neutral | N | 0.462159451 | None | None | N |
T/K | 0.1543 | likely_benign | 0.1387 | benign | -0.346 | Destabilizing | 0.002 | N | 0.16 | neutral | N | 0.370401296 | None | None | N |
T/L | 0.0948 | likely_benign | 0.0972 | benign | -0.21 | Destabilizing | 0.842 | D | 0.332 | neutral | None | None | None | None | N |
T/M | 0.0832 | likely_benign | 0.0857 | benign | -0.158 | Destabilizing | 0.991 | D | 0.354 | neutral | None | None | None | None | N |
T/N | 0.0881 | likely_benign | 0.0833 | benign | -0.28 | Destabilizing | 0.842 | D | 0.241 | neutral | None | None | None | None | N |
T/P | 0.3695 | ambiguous | 0.3613 | ambiguous | -0.32 | Destabilizing | 0.891 | D | 0.393 | neutral | N | 0.512164197 | None | None | N |
T/Q | 0.1618 | likely_benign | 0.1562 | benign | -0.38 | Destabilizing | 0.842 | D | 0.389 | neutral | None | None | None | None | N |
T/R | 0.1293 | likely_benign | 0.1195 | benign | -0.142 | Destabilizing | 0.012 | N | 0.217 | neutral | N | 0.438666516 | None | None | N |
T/S | 0.0907 | likely_benign | 0.0867 | benign | -0.595 | Destabilizing | 0.625 | D | 0.297 | neutral | N | 0.440645241 | None | None | N |
T/V | 0.0995 | likely_benign | 0.102 | benign | -0.32 | Destabilizing | 0.915 | D | 0.247 | neutral | None | None | None | None | N |
T/W | 0.5405 | ambiguous | 0.5338 | ambiguous | -0.916 | Destabilizing | 0.998 | D | 0.445 | neutral | None | None | None | None | N |
T/Y | 0.2062 | likely_benign | 0.1965 | benign | -0.641 | Destabilizing | 0.991 | D | 0.418 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.