Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5676 | 17251;17252;17253 | chr2:178731849;178731848;178731847 | chr2:179596576;179596575;179596574 |
N2AB | 5359 | 16300;16301;16302 | chr2:178731849;178731848;178731847 | chr2:179596576;179596575;179596574 |
N2A | 4432 | 13519;13520;13521 | chr2:178731849;178731848;178731847 | chr2:179596576;179596575;179596574 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.014 | N | 0.442 | 0.087 | 0.223847106136 | gnomAD-4.0.0 | 1.59132E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85853E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.0886 | likely_benign | 0.0901 | benign | -1.005 | Destabilizing | 0.002 | N | 0.253 | neutral | None | None | None | None | N |
I/C | 0.3469 | ambiguous | 0.3706 | ambiguous | -0.685 | Destabilizing | 0.245 | N | 0.352 | neutral | None | None | None | None | N |
I/D | 0.3311 | likely_benign | 0.3218 | benign | -0.033 | Destabilizing | 0.004 | N | 0.382 | neutral | None | None | None | None | N |
I/E | 0.2524 | likely_benign | 0.2494 | benign | -0.05 | Destabilizing | None | N | 0.211 | neutral | None | None | None | None | N |
I/F | 0.1179 | likely_benign | 0.1227 | benign | -0.634 | Destabilizing | 0.033 | N | 0.257 | neutral | N | 0.476819472 | None | None | N |
I/G | 0.2511 | likely_benign | 0.2597 | benign | -1.271 | Destabilizing | 0.008 | N | 0.377 | neutral | None | None | None | None | N |
I/H | 0.2124 | likely_benign | 0.2198 | benign | -0.409 | Destabilizing | 0.245 | N | 0.461 | neutral | None | None | None | None | N |
I/K | 0.1683 | likely_benign | 0.1663 | benign | -0.518 | Destabilizing | 0.004 | N | 0.37 | neutral | None | None | None | None | N |
I/L | 0.0773 | likely_benign | 0.0824 | benign | -0.383 | Destabilizing | None | N | 0.089 | neutral | N | 0.402687073 | None | None | N |
I/M | 0.0728 | likely_benign | 0.0741 | benign | -0.451 | Destabilizing | 0.033 | N | 0.318 | neutral | N | 0.457886995 | None | None | N |
I/N | 0.0981 | likely_benign | 0.1021 | benign | -0.364 | Destabilizing | 0.014 | N | 0.442 | neutral | N | 0.45736692 | None | None | N |
I/P | 0.1384 | likely_benign | 0.1456 | benign | -0.557 | Destabilizing | None | N | 0.206 | neutral | None | None | None | None | N |
I/Q | 0.1541 | likely_benign | 0.1549 | benign | -0.49 | Destabilizing | 0.001 | N | 0.239 | neutral | None | None | None | None | N |
I/R | 0.1373 | likely_benign | 0.1393 | benign | -0.033 | Destabilizing | 0.018 | N | 0.441 | neutral | None | None | None | None | N |
I/S | 0.094 | likely_benign | 0.098 | benign | -0.975 | Destabilizing | 0.003 | N | 0.287 | neutral | N | 0.415288224 | None | None | N |
I/T | 0.0701 | likely_benign | 0.0746 | benign | -0.87 | Destabilizing | None | N | 0.129 | neutral | N | 0.434836777 | None | None | N |
I/V | 0.0612 | likely_benign | 0.0618 | benign | -0.557 | Destabilizing | None | N | 0.085 | neutral | N | 0.437434365 | None | None | N |
I/W | 0.5491 | ambiguous | 0.5596 | ambiguous | -0.674 | Destabilizing | 0.497 | N | 0.431 | neutral | None | None | None | None | N |
I/Y | 0.2536 | likely_benign | 0.2747 | benign | -0.433 | Destabilizing | 0.085 | N | 0.405 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.