Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5677 | 17254;17255;17256 | chr2:178731846;178731845;178731844 | chr2:179596573;179596572;179596571 |
N2AB | 5360 | 16303;16304;16305 | chr2:178731846;178731845;178731844 | chr2:179596573;179596572;179596571 |
N2A | 4433 | 13522;13523;13524 | chr2:178731846;178731845;178731844 | chr2:179596573;179596572;179596571 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs770682637 | -0.412 | 0.984 | N | 0.623 | 0.317 | 0.602240183744 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
L/M | rs770682637 | -0.412 | 0.984 | N | 0.623 | 0.317 | 0.602240183744 | gnomAD-4.0.0 | 3.18263E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71706E-06 | 0 | 0 |
L/P | rs1269227302 | -1.175 | 0.995 | D | 0.767 | 0.58 | 0.871642052151 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/P | rs1269227302 | -1.175 | 0.995 | D | 0.767 | 0.58 | 0.871642052151 | gnomAD-4.0.0 | 3.42106E-06 | None | None | None | None | I | None | 0 | 2.23624E-05 | None | 0 | 0 | None | 0 | 0 | 1.79898E-06 | 2.31863E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7278 | likely_pathogenic | 0.6391 | pathogenic | -1.825 | Destabilizing | 0.702 | D | 0.562 | neutral | None | None | None | None | I |
L/C | 0.7747 | likely_pathogenic | 0.7404 | pathogenic | -0.986 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | I |
L/D | 0.9883 | likely_pathogenic | 0.9819 | pathogenic | -1.744 | Destabilizing | 0.996 | D | 0.767 | deleterious | None | None | None | None | I |
L/E | 0.9057 | likely_pathogenic | 0.8635 | pathogenic | -1.496 | Destabilizing | 0.988 | D | 0.732 | prob.delet. | None | None | None | None | I |
L/F | 0.3399 | likely_benign | 0.3133 | benign | -1.084 | Destabilizing | 0.976 | D | 0.571 | neutral | None | None | None | None | I |
L/G | 0.9332 | likely_pathogenic | 0.9023 | pathogenic | -2.337 | Highly Destabilizing | 0.988 | D | 0.719 | prob.delet. | None | None | None | None | I |
L/H | 0.7691 | likely_pathogenic | 0.7068 | pathogenic | -1.772 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | I |
L/I | 0.0781 | likely_benign | 0.0764 | benign | -0.346 | Destabilizing | 0.06 | N | 0.216 | neutral | None | None | None | None | I |
L/K | 0.8576 | likely_pathogenic | 0.8007 | pathogenic | -1.041 | Destabilizing | 0.988 | D | 0.695 | prob.neutral | None | None | None | None | I |
L/M | 0.1982 | likely_benign | 0.1831 | benign | -0.382 | Destabilizing | 0.984 | D | 0.623 | neutral | N | 0.494275428 | None | None | I |
L/N | 0.919 | likely_pathogenic | 0.8791 | pathogenic | -1.439 | Destabilizing | 0.996 | D | 0.769 | deleterious | None | None | None | None | I |
L/P | 0.8799 | likely_pathogenic | 0.838 | pathogenic | -0.821 | Destabilizing | 0.995 | D | 0.767 | deleterious | D | 0.531333312 | None | None | I |
L/Q | 0.6463 | likely_pathogenic | 0.5629 | ambiguous | -1.211 | Destabilizing | 0.995 | D | 0.726 | prob.delet. | N | 0.520230496 | None | None | I |
L/R | 0.7731 | likely_pathogenic | 0.7061 | pathogenic | -1.086 | Destabilizing | 0.984 | D | 0.725 | prob.delet. | D | 0.542854202 | None | None | I |
L/S | 0.8574 | likely_pathogenic | 0.7929 | pathogenic | -2.127 | Highly Destabilizing | 0.988 | D | 0.656 | neutral | None | None | None | None | I |
L/T | 0.7019 | likely_pathogenic | 0.6085 | pathogenic | -1.718 | Destabilizing | 0.919 | D | 0.589 | neutral | None | None | None | None | I |
L/V | 0.1044 | likely_benign | 0.0959 | benign | -0.821 | Destabilizing | 0.011 | N | 0.225 | neutral | N | 0.481769506 | None | None | I |
L/W | 0.7016 | likely_pathogenic | 0.6566 | pathogenic | -1.359 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
L/Y | 0.7911 | likely_pathogenic | 0.745 | pathogenic | -1.007 | Destabilizing | 0.988 | D | 0.703 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.