Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5681 | 17266;17267;17268 | chr2:178731834;178731833;178731832 | chr2:179596561;179596560;179596559 |
N2AB | 5364 | 16315;16316;16317 | chr2:178731834;178731833;178731832 | chr2:179596561;179596560;179596559 |
N2A | 4437 | 13534;13535;13536 | chr2:178731834;178731833;178731832 | chr2:179596561;179596560;179596559 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs2080582630 | None | 0.684 | N | 0.44 | 0.172 | 0.311691414656 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/G | rs2080582630 | None | 0.684 | N | 0.44 | 0.172 | 0.311691414656 | gnomAD-4.0.0 | 5.12417E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.57245E-06 | 0 | 0 |
R/S | None | None | 0.684 | N | 0.458 | 0.258 | 0.0297737177859 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.76 | likely_pathogenic | 0.6619 | pathogenic | -0.193 | Destabilizing | 0.373 | N | 0.434 | neutral | None | None | None | None | I |
R/C | 0.4973 | ambiguous | 0.4247 | ambiguous | -0.523 | Destabilizing | 0.996 | D | 0.393 | neutral | None | None | None | None | I |
R/D | 0.9074 | likely_pathogenic | 0.8503 | pathogenic | -0.502 | Destabilizing | 0.009 | N | 0.315 | neutral | None | None | None | None | I |
R/E | 0.717 | likely_pathogenic | 0.6175 | pathogenic | -0.491 | Destabilizing | 0.373 | N | 0.404 | neutral | None | None | None | None | I |
R/F | 0.8473 | likely_pathogenic | 0.7645 | pathogenic | -0.569 | Destabilizing | 0.984 | D | 0.397 | neutral | None | None | None | None | I |
R/G | 0.5292 | ambiguous | 0.4295 | ambiguous | -0.261 | Destabilizing | 0.684 | D | 0.44 | neutral | N | 0.479831908 | None | None | I |
R/H | 0.246 | likely_benign | 0.2134 | benign | -0.711 | Destabilizing | 0.953 | D | 0.432 | neutral | None | None | None | None | I |
R/I | 0.6121 | likely_pathogenic | 0.483 | ambiguous | -0.061 | Destabilizing | 0.939 | D | 0.431 | neutral | N | 0.467213004 | None | None | I |
R/K | 0.1305 | likely_benign | 0.1137 | benign | -0.528 | Destabilizing | 0.001 | N | 0.157 | neutral | N | 0.458131271 | None | None | I |
R/L | 0.5804 | likely_pathogenic | 0.4708 | ambiguous | -0.061 | Destabilizing | 0.742 | D | 0.477 | neutral | None | None | None | None | I |
R/M | 0.6134 | likely_pathogenic | 0.5003 | ambiguous | -0.371 | Destabilizing | 0.984 | D | 0.432 | neutral | None | None | None | None | I |
R/N | 0.8444 | likely_pathogenic | 0.759 | pathogenic | -0.461 | Destabilizing | 0.742 | D | 0.418 | neutral | None | None | None | None | I |
R/P | 0.674 | likely_pathogenic | 0.5838 | pathogenic | -0.093 | Destabilizing | 0.953 | D | 0.461 | neutral | None | None | None | None | I |
R/Q | 0.2014 | likely_benign | 0.1706 | benign | -0.453 | Destabilizing | 0.742 | D | 0.435 | neutral | None | None | None | None | I |
R/S | 0.8289 | likely_pathogenic | 0.7453 | pathogenic | -0.551 | Destabilizing | 0.684 | D | 0.458 | neutral | N | 0.468230835 | None | None | I |
R/T | 0.6862 | likely_pathogenic | 0.5585 | ambiguous | -0.475 | Destabilizing | 0.684 | D | 0.481 | neutral | N | 0.474004801 | None | None | I |
R/V | 0.7014 | likely_pathogenic | 0.5941 | pathogenic | -0.093 | Destabilizing | 0.742 | D | 0.473 | neutral | None | None | None | None | I |
R/W | 0.3638 | ambiguous | 0.3033 | benign | -0.811 | Destabilizing | 0.996 | D | 0.43 | neutral | None | None | None | None | I |
R/Y | 0.6907 | likely_pathogenic | 0.5753 | pathogenic | -0.474 | Destabilizing | 0.984 | D | 0.417 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.