Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5685 | 17278;17279;17280 | chr2:178731822;178731821;178731820 | chr2:179596549;179596548;179596547 |
N2AB | 5368 | 16327;16328;16329 | chr2:178731822;178731821;178731820 | chr2:179596549;179596548;179596547 |
N2A | 4441 | 13546;13547;13548 | chr2:178731822;178731821;178731820 | chr2:179596549;179596548;179596547 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs755271632 | -0.894 | 0.454 | N | 0.453 | 0.155 | 0.208816687407 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/S | rs755271632 | -0.894 | 0.454 | N | 0.453 | 0.155 | 0.208816687407 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0905 | likely_benign | 0.0918 | benign | -1.179 | Destabilizing | 0.022 | N | 0.131 | neutral | N | 0.486804393 | None | None | I |
T/C | 0.359 | ambiguous | 0.3945 | ambiguous | -0.469 | Destabilizing | 0.998 | D | 0.534 | neutral | None | None | None | None | I |
T/D | 0.5114 | ambiguous | 0.5004 | ambiguous | 0.132 | Stabilizing | 0.974 | D | 0.552 | neutral | None | None | None | None | I |
T/E | 0.4197 | ambiguous | 0.4231 | ambiguous | 0.259 | Stabilizing | 0.915 | D | 0.549 | neutral | None | None | None | None | I |
T/F | 0.2485 | likely_benign | 0.2616 | benign | -1.17 | Destabilizing | 0.949 | D | 0.611 | neutral | None | None | None | None | I |
T/G | 0.2885 | likely_benign | 0.2816 | benign | -1.514 | Destabilizing | 0.842 | D | 0.532 | neutral | None | None | None | None | I |
T/H | 0.286 | likely_benign | 0.2969 | benign | -1.452 | Destabilizing | 0.998 | D | 0.588 | neutral | None | None | None | None | I |
T/I | 0.122 | likely_benign | 0.1264 | benign | -0.326 | Destabilizing | 0.005 | N | 0.206 | neutral | N | 0.367571635 | None | None | I |
T/K | 0.2857 | likely_benign | 0.2975 | benign | -0.024 | Destabilizing | 0.915 | D | 0.55 | neutral | None | None | None | None | I |
T/L | 0.0854 | likely_benign | 0.0878 | benign | -0.326 | Destabilizing | 0.525 | D | 0.374 | neutral | None | None | None | None | I |
T/M | 0.0753 | likely_benign | 0.0792 | benign | -0.247 | Destabilizing | 0.949 | D | 0.55 | neutral | None | None | None | None | I |
T/N | 0.1243 | likely_benign | 0.1249 | benign | -0.356 | Destabilizing | 0.989 | D | 0.505 | neutral | N | 0.500851125 | None | None | I |
T/P | 0.1481 | likely_benign | 0.1368 | benign | -0.581 | Destabilizing | 0.966 | D | 0.569 | neutral | N | 0.500851125 | None | None | I |
T/Q | 0.2901 | likely_benign | 0.3056 | benign | -0.263 | Destabilizing | 0.991 | D | 0.561 | neutral | None | None | None | None | I |
T/R | 0.2415 | likely_benign | 0.2598 | benign | -0.1 | Destabilizing | 0.974 | D | 0.569 | neutral | None | None | None | None | I |
T/S | 0.1214 | likely_benign | 0.1195 | benign | -0.838 | Destabilizing | 0.454 | N | 0.453 | neutral | N | 0.491172849 | None | None | I |
T/V | 0.1185 | likely_benign | 0.1227 | benign | -0.581 | Destabilizing | 0.325 | N | 0.329 | neutral | None | None | None | None | I |
T/W | 0.6241 | likely_pathogenic | 0.6506 | pathogenic | -1.095 | Destabilizing | 0.998 | D | 0.628 | neutral | None | None | None | None | I |
T/Y | 0.2208 | likely_benign | 0.24 | benign | -0.786 | Destabilizing | 0.991 | D | 0.605 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.