Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5690 | 17293;17294;17295 | chr2:178731807;178731806;178731805 | chr2:179596534;179596533;179596532 |
N2AB | 5373 | 16342;16343;16344 | chr2:178731807;178731806;178731805 | chr2:179596534;179596533;179596532 |
N2A | 4446 | 13561;13562;13563 | chr2:178731807;178731806;178731805 | chr2:179596534;179596533;179596532 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | None | None | 0.013 | N | 0.254 | 0.14 | 0.144782658237 | gnomAD-4.0.0 | 1.3684E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79895E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1201 | likely_benign | 0.1549 | benign | -0.404 | Destabilizing | None | N | 0.253 | neutral | None | None | None | None | I |
H/C | 0.106 | likely_benign | 0.1371 | benign | 0.069 | Stabilizing | 0.316 | N | 0.524 | neutral | None | None | None | None | I |
H/D | 0.0731 | likely_benign | 0.0883 | benign | -0.511 | Destabilizing | None | N | 0.179 | neutral | N | 0.414845507 | None | None | I |
H/E | 0.1061 | likely_benign | 0.148 | benign | -0.416 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | I |
H/F | 0.2149 | likely_benign | 0.2729 | benign | 0.821 | Stabilizing | 0.009 | N | 0.429 | neutral | None | None | None | None | I |
H/G | 0.1056 | likely_benign | 0.1275 | benign | -0.762 | Destabilizing | None | N | 0.221 | neutral | None | None | None | None | I |
H/I | 0.1906 | likely_benign | 0.2651 | benign | 0.573 | Stabilizing | 0.002 | N | 0.421 | neutral | None | None | None | None | I |
H/K | 0.0914 | likely_benign | 0.1173 | benign | -0.332 | Destabilizing | None | N | 0.179 | neutral | None | None | None | None | I |
H/L | 0.0927 | likely_benign | 0.1229 | benign | 0.573 | Stabilizing | None | N | 0.275 | neutral | N | 0.484457521 | None | None | I |
H/M | 0.2464 | likely_benign | 0.3136 | benign | 0.229 | Stabilizing | 0.021 | N | 0.489 | neutral | None | None | None | None | I |
H/N | 0.0551 | likely_benign | 0.0555 | benign | -0.628 | Destabilizing | 0.001 | N | 0.192 | neutral | N | 0.421579478 | None | None | I |
H/P | 0.1171 | likely_benign | 0.1627 | benign | 0.269 | Stabilizing | 0.006 | N | 0.399 | neutral | N | 0.469816142 | None | None | I |
H/Q | 0.0689 | likely_benign | 0.09 | benign | -0.388 | Destabilizing | None | N | 0.139 | neutral | N | 0.446245849 | None | None | I |
H/R | 0.0615 | likely_benign | 0.0725 | benign | -0.928 | Destabilizing | None | N | 0.158 | neutral | N | 0.437973083 | None | None | I |
H/S | 0.0865 | likely_benign | 0.0993 | benign | -0.586 | Destabilizing | None | N | 0.179 | neutral | None | None | None | None | I |
H/T | 0.0996 | likely_benign | 0.1213 | benign | -0.37 | Destabilizing | None | N | 0.223 | neutral | None | None | None | None | I |
H/V | 0.1575 | likely_benign | 0.2119 | benign | 0.269 | Stabilizing | 0.001 | N | 0.401 | neutral | None | None | None | None | I |
H/W | 0.2545 | likely_benign | 0.3487 | ambiguous | 1.073 | Stabilizing | 0.316 | N | 0.475 | neutral | None | None | None | None | I |
H/Y | 0.081 | likely_benign | 0.0907 | benign | 1.128 | Stabilizing | 0.013 | N | 0.254 | neutral | N | 0.469642784 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.