Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5698 | 17317;17318;17319 | chr2:178731783;178731782;178731781 | chr2:179596510;179596509;179596508 |
N2AB | 5381 | 16366;16367;16368 | chr2:178731783;178731782;178731781 | chr2:179596510;179596509;179596508 |
N2A | 4454 | 13585;13586;13587 | chr2:178731783;178731782;178731781 | chr2:179596510;179596509;179596508 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.002 | N | 0.149 | 0.081 | 0.0920862733494 | gnomAD-4.0.0 | 3.18256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71687E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5722 | likely_pathogenic | 0.4845 | ambiguous | -0.175 | Destabilizing | 0.25 | N | 0.394 | neutral | None | None | None | None | N |
K/C | 0.7688 | likely_pathogenic | 0.7399 | pathogenic | -0.278 | Destabilizing | 0.992 | D | 0.337 | neutral | None | None | None | None | N |
K/D | 0.6928 | likely_pathogenic | 0.6057 | pathogenic | 0.043 | Stabilizing | 0.447 | N | 0.395 | neutral | None | None | None | None | N |
K/E | 0.4779 | ambiguous | 0.3619 | ambiguous | 0.097 | Stabilizing | 0.334 | N | 0.365 | neutral | N | 0.460787574 | None | None | N |
K/F | 0.9181 | likely_pathogenic | 0.8846 | pathogenic | -0.098 | Destabilizing | 0.92 | D | 0.372 | neutral | None | None | None | None | N |
K/G | 0.5299 | ambiguous | 0.4541 | ambiguous | -0.47 | Destabilizing | 0.4 | N | 0.388 | neutral | None | None | None | None | N |
K/H | 0.2922 | likely_benign | 0.2727 | benign | -0.793 | Destabilizing | 0.92 | D | 0.355 | neutral | None | None | None | None | N |
K/I | 0.8097 | likely_pathogenic | 0.7374 | pathogenic | 0.548 | Stabilizing | 0.447 | N | 0.391 | neutral | None | None | None | None | N |
K/L | 0.6552 | likely_pathogenic | 0.5988 | pathogenic | 0.548 | Stabilizing | 0.447 | N | 0.398 | neutral | None | None | None | None | N |
K/M | 0.5797 | likely_pathogenic | 0.4964 | ambiguous | 0.386 | Stabilizing | 0.896 | D | 0.353 | neutral | N | 0.462328386 | None | None | N |
K/N | 0.4872 | ambiguous | 0.4055 | ambiguous | -0.06 | Destabilizing | 0.016 | N | 0.303 | neutral | N | 0.43531034 | None | None | N |
K/P | 0.7836 | likely_pathogenic | 0.765 | pathogenic | 0.338 | Stabilizing | 0.972 | D | 0.381 | neutral | None | None | None | None | N |
K/Q | 0.205 | likely_benign | 0.1717 | benign | -0.196 | Destabilizing | 0.549 | D | 0.383 | neutral | N | 0.46990849 | None | None | N |
K/R | 0.0858 | likely_benign | 0.0846 | benign | -0.297 | Destabilizing | 0.002 | N | 0.149 | neutral | N | 0.438854864 | None | None | N |
K/S | 0.5587 | ambiguous | 0.467 | ambiguous | -0.627 | Destabilizing | 0.059 | N | 0.225 | neutral | None | None | None | None | N |
K/T | 0.382 | ambiguous | 0.3024 | benign | -0.393 | Destabilizing | 0.549 | D | 0.381 | neutral | N | 0.46496403 | None | None | N |
K/V | 0.7379 | likely_pathogenic | 0.6699 | pathogenic | 0.338 | Stabilizing | 0.021 | N | 0.276 | neutral | None | None | None | None | N |
K/W | 0.8593 | likely_pathogenic | 0.8271 | pathogenic | -0.034 | Destabilizing | 0.992 | D | 0.457 | neutral | None | None | None | None | N |
K/Y | 0.7353 | likely_pathogenic | 0.6829 | pathogenic | 0.277 | Stabilizing | 0.972 | D | 0.375 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.