Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5701 | 17326;17327;17328 | chr2:178731774;178731773;178731772 | chr2:179596501;179596500;179596499 |
N2AB | 5384 | 16375;16376;16377 | chr2:178731774;178731773;178731772 | chr2:179596501;179596500;179596499 |
N2A | 4457 | 13594;13595;13596 | chr2:178731774;178731773;178731772 | chr2:179596501;179596500;179596499 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | rs757714302 | -0.171 | 0.801 | N | 0.341 | 0.199 | 0.408714661073 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
A/D | rs757714302 | -0.171 | 0.801 | N | 0.341 | 0.199 | 0.408714661073 | gnomAD-4.0.0 | 1.36844E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79897E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.508 | ambiguous | 0.4673 | ambiguous | -0.741 | Destabilizing | 0.998 | D | 0.305 | neutral | None | None | None | None | I |
A/D | 0.1996 | likely_benign | 0.1868 | benign | -0.466 | Destabilizing | 0.801 | D | 0.341 | neutral | N | 0.508080089 | None | None | I |
A/E | 0.2152 | likely_benign | 0.2054 | benign | -0.549 | Destabilizing | 0.842 | D | 0.26 | neutral | None | None | None | None | I |
A/F | 0.2539 | likely_benign | 0.2464 | benign | -0.748 | Destabilizing | 0.974 | D | 0.365 | neutral | None | None | None | None | I |
A/G | 0.1166 | likely_benign | 0.1153 | benign | -0.563 | Destabilizing | 0.454 | N | 0.254 | neutral | N | 0.503770347 | None | None | I |
A/H | 0.3899 | ambiguous | 0.375 | ambiguous | -0.429 | Destabilizing | 0.037 | N | 0.297 | neutral | None | None | None | None | I |
A/I | 0.1705 | likely_benign | 0.1566 | benign | -0.226 | Destabilizing | 0.728 | D | 0.307 | neutral | None | None | None | None | I |
A/K | 0.4115 | ambiguous | 0.3852 | ambiguous | -0.732 | Destabilizing | 0.842 | D | 0.326 | neutral | None | None | None | None | I |
A/L | 0.1282 | likely_benign | 0.1225 | benign | -0.226 | Destabilizing | 0.728 | D | 0.268 | neutral | None | None | None | None | I |
A/M | 0.167 | likely_benign | 0.1594 | benign | -0.456 | Destabilizing | 0.974 | D | 0.285 | neutral | None | None | None | None | I |
A/N | 0.1782 | likely_benign | 0.1715 | benign | -0.495 | Destabilizing | 0.949 | D | 0.37 | neutral | None | None | None | None | I |
A/P | 0.1039 | likely_benign | 0.0977 | benign | -0.256 | Destabilizing | 0.012 | N | 0.198 | neutral | N | 0.424730774 | None | None | I |
A/Q | 0.2939 | likely_benign | 0.2868 | benign | -0.668 | Destabilizing | 0.974 | D | 0.321 | neutral | None | None | None | None | I |
A/R | 0.3907 | ambiguous | 0.3815 | ambiguous | -0.323 | Destabilizing | 0.949 | D | 0.31 | neutral | None | None | None | None | I |
A/S | 0.0833 | likely_benign | 0.0828 | benign | -0.766 | Destabilizing | 0.022 | N | 0.137 | neutral | N | 0.406377086 | None | None | I |
A/T | 0.0785 | likely_benign | 0.0766 | benign | -0.751 | Destabilizing | 0.669 | D | 0.24 | neutral | N | 0.472370005 | None | None | I |
A/V | 0.0995 | likely_benign | 0.0951 | benign | -0.256 | Destabilizing | 0.051 | N | 0.216 | neutral | N | 0.454437605 | None | None | I |
A/W | 0.6313 | likely_pathogenic | 0.618 | pathogenic | -0.961 | Destabilizing | 0.998 | D | 0.489 | neutral | None | None | None | None | I |
A/Y | 0.3818 | ambiguous | 0.3565 | ambiguous | -0.583 | Destabilizing | 0.949 | D | 0.381 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.