Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5702 | 17329;17330;17331 | chr2:178731771;178731770;178731769 | chr2:179596498;179596497;179596496 |
N2AB | 5385 | 16378;16379;16380 | chr2:178731771;178731770;178731769 | chr2:179596498;179596497;179596496 |
N2A | 4458 | 13597;13598;13599 | chr2:178731771;178731770;178731769 | chr2:179596498;179596497;179596496 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs2080567900 | None | None | N | 0.089 | 0.078 | 0.0401082797425 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs2080567900 | None | None | N | 0.089 | 0.078 | 0.0401082797425 | gnomAD-4.0.0 | 6.57203E-06 | None | None | None | None | I | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4175 | ambiguous | 0.3346 | benign | -0.784 | Destabilizing | 0.676 | D | 0.382 | neutral | None | None | None | None | I |
A/D | 0.2169 | likely_benign | 0.1915 | benign | -0.444 | Destabilizing | None | N | 0.243 | neutral | None | None | None | None | I |
A/E | 0.2253 | likely_benign | 0.1947 | benign | -0.577 | Destabilizing | 0.029 | N | 0.371 | neutral | N | 0.425093346 | None | None | I |
A/F | 0.2741 | likely_benign | 0.2574 | benign | -0.821 | Destabilizing | 0.356 | N | 0.427 | neutral | None | None | None | None | I |
A/G | 0.0993 | likely_benign | 0.095 | benign | -0.37 | Destabilizing | None | N | 0.09 | neutral | N | 0.45047458 | None | None | I |
A/H | 0.3924 | ambiguous | 0.329 | benign | -0.263 | Destabilizing | 0.676 | D | 0.389 | neutral | None | None | None | None | I |
A/I | 0.175 | likely_benign | 0.1649 | benign | -0.32 | Destabilizing | 0.12 | N | 0.431 | neutral | None | None | None | None | I |
A/K | 0.3987 | ambiguous | 0.3197 | benign | -0.664 | Destabilizing | 0.038 | N | 0.357 | neutral | None | None | None | None | I |
A/L | 0.1313 | likely_benign | 0.1178 | benign | -0.32 | Destabilizing | 0.038 | N | 0.376 | neutral | None | None | None | None | I |
A/M | 0.172 | likely_benign | 0.1591 | benign | -0.478 | Destabilizing | 0.676 | D | 0.369 | neutral | None | None | None | None | I |
A/N | 0.15 | likely_benign | 0.1384 | benign | -0.385 | Destabilizing | 0.038 | N | 0.447 | neutral | None | None | None | None | I |
A/P | 0.1384 | likely_benign | 0.1132 | benign | -0.282 | Destabilizing | None | N | 0.188 | neutral | N | 0.45940187 | None | None | I |
A/Q | 0.276 | likely_benign | 0.2356 | benign | -0.623 | Destabilizing | 0.214 | N | 0.425 | neutral | None | None | None | None | I |
A/R | 0.3944 | ambiguous | 0.3218 | benign | -0.189 | Destabilizing | 0.214 | N | 0.43 | neutral | None | None | None | None | I |
A/S | 0.0735 | likely_benign | 0.0751 | benign | -0.609 | Destabilizing | None | N | 0.089 | neutral | N | 0.416628578 | None | None | I |
A/T | 0.0747 | likely_benign | 0.0748 | benign | -0.656 | Destabilizing | None | N | 0.089 | neutral | N | 0.44589548 | None | None | I |
A/V | 0.1069 | likely_benign | 0.1018 | benign | -0.282 | Destabilizing | 0.029 | N | 0.254 | neutral | N | 0.509330883 | None | None | I |
A/W | 0.6043 | likely_pathogenic | 0.5557 | ambiguous | -0.968 | Destabilizing | 0.864 | D | 0.467 | neutral | None | None | None | None | I |
A/Y | 0.3761 | ambiguous | 0.3395 | benign | -0.628 | Destabilizing | 0.356 | N | 0.416 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.