Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5706 | 17341;17342;17343 | chr2:178731759;178731758;178731757 | chr2:179596486;179596485;179596484 |
N2AB | 5389 | 16390;16391;16392 | chr2:178731759;178731758;178731757 | chr2:179596486;179596485;179596484 |
N2A | 4462 | 13609;13610;13611 | chr2:178731759;178731758;178731757 | chr2:179596486;179596485;179596484 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.012 | N | 0.392 | 0.18 | 0.298403945805 | gnomAD-4.0.0 | 6.84234E-07 | None | None | None | None | I | None | 2.98811E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1176874608 | -1.534 | 0.055 | N | 0.536 | 0.255 | 0.353336612579 | gnomAD-4.0.0 | 6.84234E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15947E-05 | 0 |
E/K | rs376593556 | -0.018 | None | N | 0.189 | 0.128 | None | gnomAD-2.1.1 | 4.65E-05 | None | None | None | None | I | None | 4.96278E-04 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs376593556 | -0.018 | None | N | 0.189 | 0.128 | None | gnomAD-3.1.2 | 1.77459E-04 | None | None | None | None | I | None | 5.79151E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
E/K | rs376593556 | -0.018 | None | N | 0.189 | 0.128 | None | gnomAD-4.0.0 | 4.02818E-05 | None | None | None | None | I | None | 6.00737E-04 | 1.66711E-05 | None | 0 | 0 | None | 0 | 0 | 1.01715E-05 | 3.29431E-05 | 6.40512E-05 |
E/Q | rs376593556 | None | 0.006 | N | 0.271 | 0.128 | 0.149567049428 | gnomAD-4.0.0 | 6.84237E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15958E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1695 | likely_benign | 0.157 | benign | -0.687 | Destabilizing | 0.012 | N | 0.392 | neutral | N | 0.488441488 | None | None | I |
E/C | 0.8213 | likely_pathogenic | 0.7918 | pathogenic | -0.234 | Destabilizing | 0.864 | D | 0.585 | neutral | None | None | None | None | I |
E/D | 0.1038 | likely_benign | 0.1048 | benign | -1.07 | Destabilizing | 0.024 | N | 0.433 | neutral | N | 0.481534646 | None | None | I |
E/F | 0.6076 | likely_pathogenic | 0.5664 | pathogenic | -0.638 | Destabilizing | 0.356 | N | 0.598 | neutral | None | None | None | None | I |
E/G | 0.2346 | likely_benign | 0.2168 | benign | -0.993 | Destabilizing | 0.055 | N | 0.536 | neutral | N | 0.504939582 | None | None | I |
E/H | 0.4099 | ambiguous | 0.3648 | ambiguous | -0.98 | Destabilizing | 0.356 | N | 0.54 | neutral | None | None | None | None | I |
E/I | 0.2381 | likely_benign | 0.2147 | benign | 0.126 | Stabilizing | 0.038 | N | 0.567 | neutral | None | None | None | None | I |
E/K | 0.1519 | likely_benign | 0.1378 | benign | -0.313 | Destabilizing | None | N | 0.189 | neutral | N | 0.479723705 | None | None | I |
E/L | 0.3075 | likely_benign | 0.28 | benign | 0.126 | Stabilizing | 0.016 | N | 0.501 | neutral | None | None | None | None | I |
E/M | 0.3636 | ambiguous | 0.325 | benign | 0.596 | Stabilizing | 0.356 | N | 0.588 | neutral | None | None | None | None | I |
E/N | 0.182 | likely_benign | 0.1692 | benign | -0.629 | Destabilizing | 0.072 | N | 0.403 | neutral | None | None | None | None | I |
E/P | 0.682 | likely_pathogenic | 0.6904 | pathogenic | -0.123 | Destabilizing | 0.136 | N | 0.569 | neutral | None | None | None | None | I |
E/Q | 0.1474 | likely_benign | 0.134 | benign | -0.565 | Destabilizing | 0.006 | N | 0.271 | neutral | N | 0.486671107 | None | None | I |
E/R | 0.2721 | likely_benign | 0.2461 | benign | -0.257 | Destabilizing | 0.038 | N | 0.411 | neutral | None | None | None | None | I |
E/S | 0.1945 | likely_benign | 0.1813 | benign | -0.911 | Destabilizing | 0.003 | N | 0.203 | neutral | None | None | None | None | I |
E/T | 0.1877 | likely_benign | 0.1735 | benign | -0.657 | Destabilizing | 0.001 | N | 0.27 | neutral | None | None | None | None | I |
E/V | 0.1664 | likely_benign | 0.1528 | benign | -0.123 | Destabilizing | 0.001 | N | 0.419 | neutral | N | 0.468605421 | None | None | I |
E/W | 0.8271 | likely_pathogenic | 0.7927 | pathogenic | -0.536 | Destabilizing | 0.864 | D | 0.592 | neutral | None | None | None | None | I |
E/Y | 0.4888 | ambiguous | 0.4499 | ambiguous | -0.4 | Destabilizing | 0.356 | N | 0.597 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.