Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5711 | 17356;17357;17358 | chr2:178731744;178731743;178731742 | chr2:179596471;179596470;179596469 |
N2AB | 5394 | 16405;16406;16407 | chr2:178731744;178731743;178731742 | chr2:179596471;179596470;179596469 |
N2A | 4467 | 13624;13625;13626 | chr2:178731744;178731743;178731742 | chr2:179596471;179596470;179596469 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.76 | D | 0.625 | 0.376 | 0.446715556694 | gnomAD-4.0.0 | 6.84258E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99509E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4071 | ambiguous | 0.3771 | ambiguous | -2.392 | Highly Destabilizing | 0.046 | N | 0.329 | neutral | N | 0.416936089 | None | None | N |
V/C | 0.9444 | likely_pathogenic | 0.9343 | pathogenic | -2.189 | Highly Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
V/D | 0.9947 | likely_pathogenic | 0.9933 | pathogenic | -2.93 | Highly Destabilizing | 0.993 | D | 0.869 | deleterious | None | None | None | None | N |
V/E | 0.9858 | likely_pathogenic | 0.9818 | pathogenic | -2.663 | Highly Destabilizing | 0.982 | D | 0.843 | deleterious | D | 0.532116553 | None | None | N |
V/F | 0.8309 | likely_pathogenic | 0.8214 | pathogenic | -1.38 | Destabilizing | 0.993 | D | 0.841 | deleterious | None | None | None | None | N |
V/G | 0.7181 | likely_pathogenic | 0.6755 | pathogenic | -2.98 | Highly Destabilizing | 0.964 | D | 0.793 | deleterious | N | 0.499769157 | None | None | N |
V/H | 0.9968 | likely_pathogenic | 0.9958 | pathogenic | -2.641 | Highly Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
V/I | 0.1293 | likely_benign | 0.1335 | benign | -0.717 | Destabilizing | 0.893 | D | 0.554 | neutral | None | None | None | None | N |
V/K | 0.9935 | likely_pathogenic | 0.9911 | pathogenic | -1.9 | Destabilizing | 0.986 | D | 0.849 | deleterious | None | None | None | None | N |
V/L | 0.586 | likely_pathogenic | 0.5883 | pathogenic | -0.717 | Destabilizing | 0.76 | D | 0.625 | neutral | D | 0.538566938 | None | None | N |
V/M | 0.6217 | likely_pathogenic | 0.606 | pathogenic | -1.029 | Destabilizing | 0.997 | D | 0.759 | deleterious | D | 0.531863063 | None | None | N |
V/N | 0.9852 | likely_pathogenic | 0.9815 | pathogenic | -2.37 | Highly Destabilizing | 0.993 | D | 0.881 | deleterious | None | None | None | None | N |
V/P | 0.9942 | likely_pathogenic | 0.9928 | pathogenic | -1.252 | Destabilizing | 0.993 | D | 0.862 | deleterious | None | None | None | None | N |
V/Q | 0.9857 | likely_pathogenic | 0.981 | pathogenic | -2.132 | Highly Destabilizing | 0.993 | D | 0.871 | deleterious | None | None | None | None | N |
V/R | 0.986 | likely_pathogenic | 0.9811 | pathogenic | -1.822 | Destabilizing | 0.993 | D | 0.875 | deleterious | None | None | None | None | N |
V/S | 0.8603 | likely_pathogenic | 0.8355 | pathogenic | -3.052 | Highly Destabilizing | 0.973 | D | 0.799 | deleterious | None | None | None | None | N |
V/T | 0.757 | likely_pathogenic | 0.7399 | pathogenic | -2.623 | Highly Destabilizing | 0.953 | D | 0.649 | neutral | None | None | None | None | N |
V/W | 0.9978 | likely_pathogenic | 0.9972 | pathogenic | -1.841 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
V/Y | 0.9872 | likely_pathogenic | 0.9824 | pathogenic | -1.522 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.