Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5713 | 17362;17363;17364 | chr2:178731738;178731737;178731736 | chr2:179596465;179596464;179596463 |
N2AB | 5396 | 16411;16412;16413 | chr2:178731738;178731737;178731736 | chr2:179596465;179596464;179596463 |
N2A | 4469 | 13630;13631;13632 | chr2:178731738;178731737;178731736 | chr2:179596465;179596464;179596463 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs374597389 | None | 0.001 | N | 0.302 | 0.323 | 0.126345400529 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs374597389 | None | 0.001 | N | 0.302 | 0.323 | 0.126345400529 | gnomAD-4.0.0 | 2.0299E-06 | None | None | None | None | I | None | 3.49455E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9818 | likely_pathogenic | 0.9731 | pathogenic | -0.93 | Destabilizing | 0.157 | N | 0.579 | neutral | None | None | None | None | I |
N/C | 0.9586 | likely_pathogenic | 0.947 | pathogenic | -0.199 | Destabilizing | 0.909 | D | 0.744 | deleterious | None | None | None | None | I |
N/D | 0.9193 | likely_pathogenic | 0.8935 | pathogenic | -1.029 | Destabilizing | 0.124 | N | 0.598 | neutral | D | 0.540738066 | None | None | I |
N/E | 0.9932 | likely_pathogenic | 0.9903 | pathogenic | -0.92 | Destabilizing | 0.157 | N | 0.619 | neutral | None | None | None | None | I |
N/F | 0.9992 | likely_pathogenic | 0.9987 | pathogenic | -0.647 | Destabilizing | 0.726 | D | 0.736 | prob.delet. | None | None | None | None | I |
N/G | 0.9421 | likely_pathogenic | 0.9236 | pathogenic | -1.271 | Destabilizing | 0.157 | N | 0.541 | neutral | None | None | None | None | I |
N/H | 0.9539 | likely_pathogenic | 0.9323 | pathogenic | -1.008 | Destabilizing | 0.667 | D | 0.614 | neutral | D | 0.542005513 | None | None | I |
N/I | 0.9943 | likely_pathogenic | 0.9897 | pathogenic | -0.056 | Destabilizing | 0.009 | N | 0.523 | neutral | D | 0.542259003 | None | None | I |
N/K | 0.9954 | likely_pathogenic | 0.9932 | pathogenic | -0.35 | Destabilizing | 0.124 | N | 0.619 | neutral | D | 0.530142229 | None | None | I |
N/L | 0.9782 | likely_pathogenic | 0.9675 | pathogenic | -0.056 | Destabilizing | 0.157 | N | 0.659 | neutral | None | None | None | None | I |
N/M | 0.9898 | likely_pathogenic | 0.9827 | pathogenic | 0.388 | Stabilizing | 0.909 | D | 0.713 | prob.delet. | None | None | None | None | I |
N/P | 0.9923 | likely_pathogenic | 0.9895 | pathogenic | -0.319 | Destabilizing | 0.567 | D | 0.721 | prob.delet. | None | None | None | None | I |
N/Q | 0.9944 | likely_pathogenic | 0.9919 | pathogenic | -1.023 | Destabilizing | 0.567 | D | 0.659 | neutral | None | None | None | None | I |
N/R | 0.9915 | likely_pathogenic | 0.9892 | pathogenic | -0.36 | Destabilizing | 0.567 | D | 0.663 | neutral | None | None | None | None | I |
N/S | 0.5145 | ambiguous | 0.4575 | ambiguous | -1.001 | Destabilizing | 0.001 | N | 0.302 | neutral | N | 0.49643848 | None | None | I |
N/T | 0.9006 | likely_pathogenic | 0.8543 | pathogenic | -0.71 | Destabilizing | 0.124 | N | 0.576 | neutral | N | 0.518278945 | None | None | I |
N/V | 0.9869 | likely_pathogenic | 0.978 | pathogenic | -0.319 | Destabilizing | 0.157 | N | 0.68 | prob.neutral | None | None | None | None | I |
N/W | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -0.399 | Destabilizing | 0.968 | D | 0.725 | prob.delet. | None | None | None | None | I |
N/Y | 0.9881 | likely_pathogenic | 0.9836 | pathogenic | -0.174 | Destabilizing | 0.667 | D | 0.706 | prob.neutral | D | 0.542005513 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.