Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5714 | 17365;17366;17367 | chr2:178731735;178731734;178731733 | chr2:179596462;179596461;179596460 |
N2AB | 5397 | 16414;16415;16416 | chr2:178731735;178731734;178731733 | chr2:179596462;179596461;179596460 |
N2A | 4470 | 13633;13634;13635 | chr2:178731735;178731734;178731733 | chr2:179596462;179596461;179596460 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs772995909 | 0.017 | 0.351 | N | 0.384 | 0.159 | 0.355865052028 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
E/G | rs772995909 | 0.017 | 0.351 | N | 0.384 | 0.159 | 0.355865052028 | gnomAD-4.0.0 | 1.36862E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52029E-05 | None | 0 | 0 | 8.99567E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2245 | likely_benign | 0.2018 | benign | -0.037 | Destabilizing | 0.101 | N | 0.403 | neutral | N | 0.48186272 | None | None | I |
E/C | 0.9411 | likely_pathogenic | 0.9352 | pathogenic | -0.163 | Destabilizing | 0.951 | D | 0.345 | neutral | None | None | None | None | I |
E/D | 0.1169 | likely_benign | 0.1141 | benign | -0.355 | Destabilizing | 0.001 | N | 0.19 | neutral | N | 0.460564728 | None | None | I |
E/F | 0.8942 | likely_pathogenic | 0.8917 | pathogenic | -0.11 | Destabilizing | 0.716 | D | 0.375 | neutral | None | None | None | None | I |
E/G | 0.2954 | likely_benign | 0.26 | benign | -0.142 | Destabilizing | 0.351 | N | 0.384 | neutral | N | 0.475379465 | None | None | I |
E/H | 0.6609 | likely_pathogenic | 0.635 | pathogenic | 0.471 | Stabilizing | 0.836 | D | 0.377 | neutral | None | None | None | None | I |
E/I | 0.547 | ambiguous | 0.5485 | ambiguous | 0.18 | Stabilizing | 0.01 | N | 0.339 | neutral | None | None | None | None | I |
E/K | 0.2805 | likely_benign | 0.2565 | benign | 0.411 | Stabilizing | 0.351 | N | 0.393 | neutral | N | 0.494733229 | None | None | I |
E/L | 0.6291 | likely_pathogenic | 0.6067 | pathogenic | 0.18 | Stabilizing | 0.129 | N | 0.377 | neutral | None | None | None | None | I |
E/M | 0.6445 | likely_pathogenic | 0.6412 | pathogenic | -0.004 | Destabilizing | 0.716 | D | 0.381 | neutral | None | None | None | None | I |
E/N | 0.3788 | ambiguous | 0.3579 | ambiguous | 0.185 | Stabilizing | 0.004 | N | 0.195 | neutral | None | None | None | None | I |
E/P | 0.7212 | likely_pathogenic | 0.6261 | pathogenic | 0.125 | Stabilizing | 0.836 | D | 0.439 | neutral | None | None | None | None | I |
E/Q | 0.2584 | likely_benign | 0.2377 | benign | 0.188 | Stabilizing | 0.523 | D | 0.384 | neutral | N | 0.483556231 | None | None | I |
E/R | 0.443 | ambiguous | 0.4107 | ambiguous | 0.611 | Stabilizing | 0.836 | D | 0.375 | neutral | None | None | None | None | I |
E/S | 0.2946 | likely_benign | 0.2694 | benign | 0.055 | Stabilizing | 0.228 | N | 0.377 | neutral | None | None | None | None | I |
E/T | 0.3592 | ambiguous | 0.3423 | ambiguous | 0.15 | Stabilizing | 0.418 | N | 0.415 | neutral | None | None | None | None | I |
E/V | 0.3494 | ambiguous | 0.3396 | benign | 0.125 | Stabilizing | 0.002 | N | 0.264 | neutral | N | 0.517650161 | None | None | I |
E/W | 0.9658 | likely_pathogenic | 0.9607 | pathogenic | -0.074 | Destabilizing | 0.983 | D | 0.429 | neutral | None | None | None | None | I |
E/Y | 0.7994 | likely_pathogenic | 0.7909 | pathogenic | 0.109 | Stabilizing | 0.836 | D | 0.401 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.