Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5715 | 17368;17369;17370 | chr2:178731732;178731731;178731730 | chr2:179596459;179596458;179596457 |
N2AB | 5398 | 16417;16418;16419 | chr2:178731732;178731731;178731730 | chr2:179596459;179596458;179596457 |
N2A | 4471 | 13636;13637;13638 | chr2:178731732;178731731;178731730 | chr2:179596459;179596458;179596457 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1279938466 | None | 0.999 | N | 0.586 | 0.373 | 0.46289702323 | gnomAD-4.0.0 | 6.84394E-07 | None | None | None | None | I | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/E | None | None | 1.0 | N | 0.709 | 0.54 | 0.830966879155 | gnomAD-4.0.0 | 4.10637E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.3983E-06 | 0 | 0 |
V/M | None | None | 1.0 | N | 0.737 | 0.411 | 0.534814951121 | gnomAD-4.0.0 | 2.05297E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79919E-06 | 0 | 1.65684E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.219 | likely_benign | 0.2526 | benign | -0.365 | Destabilizing | 0.999 | D | 0.586 | neutral | N | 0.503139282 | None | None | I |
V/C | 0.9147 | likely_pathogenic | 0.9195 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
V/D | 0.8462 | likely_pathogenic | 0.8833 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
V/E | 0.7249 | likely_pathogenic | 0.7806 | pathogenic | -0.524 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.489735389 | None | None | I |
V/F | 0.3325 | likely_benign | 0.3891 | ambiguous | -0.766 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
V/G | 0.4111 | ambiguous | 0.4922 | ambiguous | -0.409 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.495798549 | None | None | I |
V/H | 0.899 | likely_pathogenic | 0.9169 | pathogenic | -0.015 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
V/I | 0.1359 | likely_benign | 0.1421 | benign | -0.388 | Destabilizing | 0.998 | D | 0.519 | neutral | None | None | None | None | I |
V/K | 0.8742 | likely_pathogenic | 0.8983 | pathogenic | -0.409 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
V/L | 0.6137 | likely_pathogenic | 0.6231 | pathogenic | -0.388 | Destabilizing | 0.997 | D | 0.605 | neutral | N | 0.502659279 | None | None | I |
V/M | 0.3805 | ambiguous | 0.4475 | ambiguous | -0.606 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.489735389 | None | None | I |
V/N | 0.7254 | likely_pathogenic | 0.7617 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
V/P | 0.9655 | likely_pathogenic | 0.9686 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
V/Q | 0.8165 | likely_pathogenic | 0.8472 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
V/R | 0.8124 | likely_pathogenic | 0.8328 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
V/S | 0.4759 | ambiguous | 0.531 | ambiguous | -0.519 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
V/T | 0.3347 | likely_benign | 0.3675 | ambiguous | -0.552 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
V/W | 0.9394 | likely_pathogenic | 0.9568 | pathogenic | -0.808 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
V/Y | 0.7973 | likely_pathogenic | 0.828 | pathogenic | -0.545 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.