Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5716 | 17371;17372;17373 | chr2:178731729;178731728;178731727 | chr2:179596456;179596455;179596454 |
N2AB | 5399 | 16420;16421;16422 | chr2:178731729;178731728;178731727 | chr2:179596456;179596455;179596454 |
N2A | 4472 | 13639;13640;13641 | chr2:178731729;178731728;178731727 | chr2:179596456;179596455;179596454 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 1.0 | D | 0.74 | 0.686 | 0.605229780939 | gnomAD-4.0.0 | 6.84536E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65733E-05 |
G/D | rs952474808 | None | 1.0 | D | 0.846 | 0.68 | 0.664105290246 | gnomAD-4.0.0 | 6.16082E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19923E-06 | 0 | 1.65733E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7621 | likely_pathogenic | 0.5996 | pathogenic | -0.248 | Destabilizing | 1.0 | D | 0.74 | deleterious | D | 0.586906453 | None | None | I |
G/C | 0.9397 | likely_pathogenic | 0.8775 | pathogenic | -0.867 | Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.613655391 | None | None | I |
G/D | 0.908 | likely_pathogenic | 0.7806 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.576984094 | None | None | I |
G/E | 0.9519 | likely_pathogenic | 0.8717 | pathogenic | -0.692 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/F | 0.989 | likely_pathogenic | 0.9802 | pathogenic | -1.06 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
G/H | 0.9864 | likely_pathogenic | 0.9687 | pathogenic | -0.442 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
G/I | 0.9857 | likely_pathogenic | 0.9696 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/K | 0.9867 | likely_pathogenic | 0.9721 | pathogenic | -0.637 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/L | 0.9842 | likely_pathogenic | 0.9674 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
G/M | 0.9906 | likely_pathogenic | 0.9795 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
G/N | 0.9529 | likely_pathogenic | 0.9013 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/P | 0.998 | likely_pathogenic | 0.997 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/Q | 0.9695 | likely_pathogenic | 0.9282 | pathogenic | -0.639 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
G/R | 0.9626 | likely_pathogenic | 0.9222 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.612646369 | None | None | I |
G/S | 0.6344 | likely_pathogenic | 0.4904 | ambiguous | -0.461 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.574460643 | None | None | I |
G/T | 0.9213 | likely_pathogenic | 0.8593 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
G/V | 0.9683 | likely_pathogenic | 0.9366 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.629271143 | None | None | I |
G/W | 0.9829 | likely_pathogenic | 0.9654 | pathogenic | -1.176 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
G/Y | 0.9831 | likely_pathogenic | 0.9639 | pathogenic | -0.835 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.