Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5717 | 17374;17375;17376 | chr2:178731726;178731725;178731724 | chr2:179596453;179596452;179596451 |
N2AB | 5400 | 16423;16424;16425 | chr2:178731726;178731725;178731724 | chr2:179596453;179596452;179596451 |
N2A | 4473 | 13642;13643;13644 | chr2:178731726;178731725;178731724 | chr2:179596453;179596452;179596451 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1484523576 | -0.406 | 0.837 | D | 0.294 | 0.211 | 0.220303561663 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
S/N | rs1484523576 | -0.406 | 0.837 | D | 0.294 | 0.211 | 0.220303561663 | gnomAD-4.0.0 | 9.5843E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.25991E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1022 | likely_benign | 0.0963 | benign | -0.493 | Destabilizing | 0.737 | D | 0.287 | neutral | None | None | None | None | I |
S/C | 0.1477 | likely_benign | 0.1504 | benign | -0.386 | Destabilizing | 0.998 | D | 0.517 | neutral | N | 0.502408367 | None | None | I |
S/D | 0.4032 | ambiguous | 0.317 | benign | 0.107 | Stabilizing | 0.872 | D | 0.286 | neutral | None | None | None | None | I |
S/E | 0.5051 | ambiguous | 0.4053 | ambiguous | 0.026 | Stabilizing | 0.584 | D | 0.335 | neutral | None | None | None | None | I |
S/F | 0.196 | likely_benign | 0.1836 | benign | -0.961 | Destabilizing | 0.98 | D | 0.63 | neutral | None | None | None | None | I |
S/G | 0.1028 | likely_benign | 0.1066 | benign | -0.633 | Destabilizing | 0.811 | D | 0.305 | neutral | N | 0.49464646 | None | None | I |
S/H | 0.3414 | ambiguous | 0.2918 | benign | -1.12 | Destabilizing | 0.047 | N | 0.301 | neutral | None | None | None | None | I |
S/I | 0.1885 | likely_benign | 0.1788 | benign | -0.249 | Destabilizing | 0.947 | D | 0.599 | neutral | N | 0.485367296 | None | None | I |
S/K | 0.655 | likely_pathogenic | 0.5554 | ambiguous | -0.562 | Destabilizing | 0.083 | N | 0.115 | neutral | None | None | None | None | I |
S/L | 0.1378 | likely_benign | 0.1346 | benign | -0.249 | Destabilizing | 0.872 | D | 0.579 | neutral | None | None | None | None | I |
S/M | 0.2331 | likely_benign | 0.2223 | benign | 0.023 | Stabilizing | 0.993 | D | 0.53 | neutral | None | None | None | None | I |
S/N | 0.1249 | likely_benign | 0.1172 | benign | -0.297 | Destabilizing | 0.837 | D | 0.294 | neutral | D | 0.52470942 | None | None | I |
S/P | 0.6756 | likely_pathogenic | 0.6634 | pathogenic | -0.3 | Destabilizing | 0.977 | D | 0.486 | neutral | None | None | None | None | I |
S/Q | 0.4903 | ambiguous | 0.4162 | ambiguous | -0.571 | Destabilizing | 0.209 | N | 0.231 | neutral | None | None | None | None | I |
S/R | 0.5558 | ambiguous | 0.4621 | ambiguous | -0.34 | Destabilizing | 0.016 | N | 0.266 | neutral | N | 0.501467201 | None | None | I |
S/T | 0.0877 | likely_benign | 0.083 | benign | -0.426 | Destabilizing | 0.064 | N | 0.13 | neutral | N | 0.481361287 | None | None | I |
S/V | 0.1937 | likely_benign | 0.1854 | benign | -0.3 | Destabilizing | 0.872 | D | 0.57 | neutral | None | None | None | None | I |
S/W | 0.4176 | ambiguous | 0.381 | ambiguous | -0.914 | Destabilizing | 0.998 | D | 0.638 | neutral | None | None | None | None | I |
S/Y | 0.2014 | likely_benign | 0.179 | benign | -0.659 | Destabilizing | 0.96 | D | 0.608 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.