Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5718 | 17377;17378;17379 | chr2:178731723;178731722;178731721 | chr2:179596450;179596449;179596448 |
N2AB | 5401 | 16426;16427;16428 | chr2:178731723;178731722;178731721 | chr2:179596450;179596449;179596448 |
N2A | 4474 | 13645;13646;13647 | chr2:178731723;178731722;178731721 | chr2:179596450;179596449;179596448 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.351 | N | 0.407 | 0.153 | 0.165133752707 | gnomAD-4.0.0 | 6.8467E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00045E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0744 | likely_benign | 0.0747 | benign | -0.589 | Destabilizing | None | N | 0.097 | neutral | None | None | None | None | I |
S/C | 0.084 | likely_benign | 0.0859 | benign | -0.345 | Destabilizing | 0.001 | N | 0.243 | neutral | N | 0.44992366 | None | None | I |
S/D | 0.3047 | likely_benign | 0.2807 | benign | 0.363 | Stabilizing | 0.001 | N | 0.18 | neutral | None | None | None | None | I |
S/E | 0.5341 | ambiguous | 0.491 | ambiguous | 0.392 | Stabilizing | 0.004 | N | 0.168 | neutral | None | None | None | None | I |
S/F | 0.2757 | likely_benign | 0.2637 | benign | -0.695 | Destabilizing | 0.836 | D | 0.625 | neutral | None | None | None | None | I |
S/G | 0.0887 | likely_benign | 0.096 | benign | -0.861 | Destabilizing | 0.101 | N | 0.365 | neutral | N | 0.483420158 | None | None | I |
S/H | 0.3779 | ambiguous | 0.3517 | ambiguous | -1.195 | Destabilizing | 0.94 | D | 0.557 | neutral | None | None | None | None | I |
S/I | 0.2002 | likely_benign | 0.1811 | benign | 0.032 | Stabilizing | 0.101 | N | 0.503 | neutral | N | 0.421294263 | None | None | I |
S/K | 0.7125 | likely_pathogenic | 0.6605 | pathogenic | -0.265 | Destabilizing | 0.228 | N | 0.363 | neutral | None | None | None | None | I |
S/L | 0.148 | likely_benign | 0.1402 | benign | 0.032 | Stabilizing | 0.129 | N | 0.514 | neutral | None | None | None | None | I |
S/M | 0.2682 | likely_benign | 0.2505 | benign | 0.031 | Stabilizing | 0.836 | D | 0.562 | neutral | None | None | None | None | I |
S/N | 0.1395 | likely_benign | 0.1324 | benign | -0.291 | Destabilizing | 0.351 | N | 0.407 | neutral | N | 0.482726724 | None | None | I |
S/P | 0.8341 | likely_pathogenic | 0.8392 | pathogenic | -0.14 | Destabilizing | 0.593 | D | 0.555 | neutral | None | None | None | None | I |
S/Q | 0.5437 | ambiguous | 0.5003 | ambiguous | -0.332 | Destabilizing | 0.418 | N | 0.466 | neutral | None | None | None | None | I |
S/R | 0.5646 | likely_pathogenic | 0.519 | ambiguous | -0.293 | Destabilizing | 0.351 | N | 0.575 | neutral | N | 0.451577098 | None | None | I |
S/T | 0.0941 | likely_benign | 0.0919 | benign | -0.335 | Destabilizing | 0.003 | N | 0.143 | neutral | N | 0.433164696 | None | None | I |
S/V | 0.1709 | likely_benign | 0.1632 | benign | -0.14 | Destabilizing | 0.004 | N | 0.328 | neutral | None | None | None | None | I |
S/W | 0.4743 | ambiguous | 0.4488 | ambiguous | -0.693 | Destabilizing | 0.983 | D | 0.61 | neutral | None | None | None | None | I |
S/Y | 0.2244 | likely_benign | 0.2104 | benign | -0.379 | Destabilizing | 0.94 | D | 0.623 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.