Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5719 | 17380;17381;17382 | chr2:178731720;178731719;178731718 | chr2:179596447;179596446;179596445 |
N2AB | 5402 | 16429;16430;16431 | chr2:178731720;178731719;178731718 | chr2:179596447;179596446;179596445 |
N2A | 4475 | 13648;13649;13650 | chr2:178731720;178731719;178731718 | chr2:179596447;179596446;179596445 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.033 | N | 0.409 | 0.06 | 0.369495900351 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/T | rs769635185 | -0.779 | None | N | 0.159 | 0.115 | 0.292062946507 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
I/T | rs769635185 | -0.779 | None | N | 0.159 | 0.115 | 0.292062946507 | gnomAD-4.0.0 | 8.21832E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.08043E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.0893 | likely_benign | 0.0892 | benign | -1.331 | Destabilizing | None | N | 0.163 | neutral | None | None | None | None | I |
I/C | 0.3473 | ambiguous | 0.3449 | ambiguous | -0.816 | Destabilizing | 0.245 | N | 0.423 | neutral | None | None | None | None | I |
I/D | 0.2357 | likely_benign | 0.2097 | benign | -0.258 | Destabilizing | 0.004 | N | 0.324 | neutral | None | None | None | None | I |
I/E | 0.2217 | likely_benign | 0.197 | benign | -0.259 | Destabilizing | None | N | 0.325 | neutral | None | None | None | None | I |
I/F | 0.0862 | likely_benign | 0.0846 | benign | -0.853 | Destabilizing | 0.033 | N | 0.358 | neutral | N | 0.440282669 | None | None | I |
I/G | 0.2007 | likely_benign | 0.2026 | benign | -1.632 | Destabilizing | 0.004 | N | 0.322 | neutral | None | None | None | None | I |
I/H | 0.1794 | likely_benign | 0.1663 | benign | -0.686 | Destabilizing | 0.497 | N | 0.478 | neutral | None | None | None | None | I |
I/K | 0.1642 | likely_benign | 0.1428 | benign | -0.688 | Destabilizing | 0.008 | N | 0.313 | neutral | None | None | None | None | I |
I/L | 0.0744 | likely_benign | 0.074 | benign | -0.594 | Destabilizing | None | N | 0.095 | neutral | N | 0.415058937 | None | None | I |
I/M | 0.0785 | likely_benign | 0.0778 | benign | -0.535 | Destabilizing | 0.033 | N | 0.409 | neutral | N | 0.449075511 | None | None | I |
I/N | 0.0812 | likely_benign | 0.077 | benign | -0.513 | Destabilizing | 0.014 | N | 0.362 | neutral | N | 0.423870422 | None | None | I |
I/P | 0.3638 | ambiguous | 0.3852 | ambiguous | -0.807 | Destabilizing | 0.037 | N | 0.403 | neutral | None | None | None | None | I |
I/Q | 0.1684 | likely_benign | 0.1555 | benign | -0.66 | Destabilizing | 0.018 | N | 0.428 | neutral | None | None | None | None | I |
I/R | 0.122 | likely_benign | 0.1083 | benign | -0.148 | Destabilizing | 0.018 | N | 0.402 | neutral | None | None | None | None | I |
I/S | 0.0684 | likely_benign | 0.066 | benign | -1.199 | Destabilizing | None | N | 0.209 | neutral | N | 0.34465749 | None | None | I |
I/T | 0.0609 | likely_benign | 0.0585 | benign | -1.075 | Destabilizing | None | N | 0.159 | neutral | N | 0.36760892 | None | None | I |
I/V | 0.0611 | likely_benign | 0.0618 | benign | -0.807 | Destabilizing | None | N | 0.1 | neutral | N | 0.406978172 | None | None | I |
I/W | 0.4896 | ambiguous | 0.4711 | ambiguous | -0.862 | Destabilizing | 0.497 | N | 0.449 | neutral | None | None | None | None | I |
I/Y | 0.226 | likely_benign | 0.2134 | benign | -0.639 | Destabilizing | 0.085 | N | 0.448 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.