Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5720 | 17383;17384;17385 | chr2:178731717;178731716;178731715 | chr2:179596444;179596443;179596442 |
N2AB | 5403 | 16432;16433;16434 | chr2:178731717;178731716;178731715 | chr2:179596444;179596443;179596442 |
N2A | 4476 | 13651;13652;13653 | chr2:178731717;178731716;178731715 | chr2:179596444;179596443;179596442 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs748067586 | -2.114 | 0.03 | N | 0.564 | 0.259 | 0.733364837216 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.31053E-04 | None | 0 | 0 | 0 |
C/G | rs748067586 | -2.114 | 0.03 | N | 0.564 | 0.259 | 0.733364837216 | gnomAD-4.0.0 | 4.7942E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.9625E-05 | 1.6581E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4538 | ambiguous | 0.4082 | ambiguous | -1.829 | Destabilizing | 0.864 | D | 0.56 | neutral | None | None | None | None | N |
C/D | 0.8626 | likely_pathogenic | 0.8402 | pathogenic | -0.408 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | N |
C/E | 0.9376 | likely_pathogenic | 0.9201 | pathogenic | -0.236 | Destabilizing | 0.991 | D | 0.808 | deleterious | None | None | None | None | N |
C/F | 0.4611 | ambiguous | 0.4284 | ambiguous | -1.081 | Destabilizing | 0.998 | D | 0.792 | deleterious | N | 0.500113735 | None | None | N |
C/G | 0.2286 | likely_benign | 0.21 | benign | -2.181 | Highly Destabilizing | 0.03 | N | 0.564 | neutral | N | 0.486124083 | None | None | N |
C/H | 0.756 | likely_pathogenic | 0.7174 | pathogenic | -2.062 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
C/I | 0.6987 | likely_pathogenic | 0.6261 | pathogenic | -0.893 | Destabilizing | 0.995 | D | 0.809 | deleterious | None | None | None | None | N |
C/K | 0.9331 | likely_pathogenic | 0.9156 | pathogenic | -0.773 | Destabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
C/L | 0.6627 | likely_pathogenic | 0.5778 | pathogenic | -0.893 | Destabilizing | 0.984 | D | 0.769 | deleterious | None | None | None | None | N |
C/M | 0.8337 | likely_pathogenic | 0.7765 | pathogenic | 0.169 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
C/N | 0.7095 | likely_pathogenic | 0.6633 | pathogenic | -1.056 | Destabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
C/P | 0.9864 | likely_pathogenic | 0.9834 | pathogenic | -1.181 | Destabilizing | 0.995 | D | 0.827 | deleterious | None | None | None | None | N |
C/Q | 0.8334 | likely_pathogenic | 0.7909 | pathogenic | -0.779 | Destabilizing | 0.995 | D | 0.824 | deleterious | None | None | None | None | N |
C/R | 0.6856 | likely_pathogenic | 0.6537 | pathogenic | -0.88 | Destabilizing | 0.994 | D | 0.827 | deleterious | D | 0.529613807 | None | None | N |
C/S | 0.2701 | likely_benign | 0.2434 | benign | -1.594 | Destabilizing | 0.476 | N | 0.568 | neutral | N | 0.4722963 | None | None | N |
C/T | 0.4552 | ambiguous | 0.3953 | ambiguous | -1.218 | Destabilizing | 0.939 | D | 0.764 | deleterious | None | None | None | None | N |
C/V | 0.5903 | likely_pathogenic | 0.5243 | ambiguous | -1.181 | Destabilizing | 0.984 | D | 0.778 | deleterious | None | None | None | None | N |
C/W | 0.8396 | likely_pathogenic | 0.8094 | pathogenic | -1.143 | Destabilizing | 0.999 | D | 0.773 | deleterious | N | 0.507457569 | None | None | N |
C/Y | 0.635 | likely_pathogenic | 0.5816 | pathogenic | -1.096 | Destabilizing | 0.998 | D | 0.793 | deleterious | N | 0.495594285 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.