Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5726 | 17401;17402;17403 | chr2:178731699;178731698;178731697 | chr2:179596426;179596425;179596424 |
N2AB | 5409 | 16450;16451;16452 | chr2:178731699;178731698;178731697 | chr2:179596426;179596425;179596424 |
N2A | 4482 | 13669;13670;13671 | chr2:178731699;178731698;178731697 | chr2:179596426;179596425;179596424 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.956 | N | 0.401 | 0.133 | 0.223847106136 | gnomAD-4.0.0 | 1.60296E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03933E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.462 | ambiguous | 0.3825 | ambiguous | -1.617 | Destabilizing | 0.983 | D | 0.471 | neutral | None | None | None | None | I |
L/C | 0.687 | likely_pathogenic | 0.6182 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.536 | neutral | None | None | None | None | I |
L/D | 0.9378 | likely_pathogenic | 0.9114 | pathogenic | -0.773 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | I |
L/E | 0.655 | likely_pathogenic | 0.5826 | pathogenic | -0.698 | Destabilizing | 0.99 | D | 0.591 | neutral | None | None | None | None | I |
L/F | 0.2373 | likely_benign | 0.2084 | benign | -0.891 | Destabilizing | 0.994 | D | 0.457 | neutral | N | 0.505943861 | None | None | I |
L/G | 0.7924 | likely_pathogenic | 0.7137 | pathogenic | -2.008 | Highly Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | I |
L/H | 0.5476 | ambiguous | 0.4773 | ambiguous | -1.158 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | I |
L/I | 0.1132 | likely_benign | 0.1121 | benign | -0.587 | Destabilizing | 0.956 | D | 0.401 | neutral | N | 0.456146972 | None | None | I |
L/K | 0.5844 | likely_pathogenic | 0.507 | ambiguous | -1.0 | Destabilizing | 0.99 | D | 0.501 | neutral | None | None | None | None | I |
L/M | 0.1492 | likely_benign | 0.1381 | benign | -0.495 | Destabilizing | 0.923 | D | 0.321 | neutral | None | None | None | None | I |
L/N | 0.7476 | likely_pathogenic | 0.6726 | pathogenic | -0.934 | Destabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | I |
L/P | 0.5688 | likely_pathogenic | 0.4511 | ambiguous | -0.9 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
L/Q | 0.3046 | likely_benign | 0.2519 | benign | -0.986 | Destabilizing | 0.923 | D | 0.357 | neutral | None | None | None | None | I |
L/R | 0.4544 | ambiguous | 0.3997 | ambiguous | -0.558 | Destabilizing | 0.995 | D | 0.595 | neutral | None | None | None | None | I |
L/S | 0.5832 | likely_pathogenic | 0.4866 | ambiguous | -1.652 | Destabilizing | 0.994 | D | 0.501 | neutral | N | 0.47289777 | None | None | I |
L/T | 0.4424 | ambiguous | 0.3785 | ambiguous | -1.45 | Destabilizing | 0.998 | D | 0.477 | neutral | None | None | None | None | I |
L/V | 0.1111 | likely_benign | 0.1069 | benign | -0.9 | Destabilizing | 0.956 | D | 0.417 | neutral | N | 0.390614547 | None | None | I |
L/W | 0.4944 | ambiguous | 0.4316 | ambiguous | -1.026 | Destabilizing | 1.0 | D | 0.606 | neutral | None | None | None | None | I |
L/Y | 0.6046 | likely_pathogenic | 0.5295 | ambiguous | -0.765 | Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.