Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC572617401;17402;17403 chr2:178731699;178731698;178731697chr2:179596426;179596425;179596424
N2AB540916450;16451;16452 chr2:178731699;178731698;178731697chr2:179596426;179596425;179596424
N2A448213669;13670;13671 chr2:178731699;178731698;178731697chr2:179596426;179596425;179596424
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: TTA
  • RefSeq wild type template codon: AAT
  • Domain: Ig-40
  • Domain position: 90
  • Structural Position: 177
  • Q(SASA): 0.7116
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/I None None 0.956 N 0.401 0.133 0.223847106136 gnomAD-4.0.0 1.60296E-06 None None None None I None 0 0 None 0 0 None 0 0 0 0 3.03933E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.462 ambiguous 0.3825 ambiguous -1.617 Destabilizing 0.983 D 0.471 neutral None None None None I
L/C 0.687 likely_pathogenic 0.6182 pathogenic -0.892 Destabilizing 1.0 D 0.536 neutral None None None None I
L/D 0.9378 likely_pathogenic 0.9114 pathogenic -0.773 Destabilizing 0.998 D 0.633 neutral None None None None I
L/E 0.655 likely_pathogenic 0.5826 pathogenic -0.698 Destabilizing 0.99 D 0.591 neutral None None None None I
L/F 0.2373 likely_benign 0.2084 benign -0.891 Destabilizing 0.994 D 0.457 neutral N 0.505943861 None None I
L/G 0.7924 likely_pathogenic 0.7137 pathogenic -2.008 Highly Destabilizing 0.998 D 0.643 neutral None None None None I
L/H 0.5476 ambiguous 0.4773 ambiguous -1.158 Destabilizing 0.999 D 0.601 neutral None None None None I
L/I 0.1132 likely_benign 0.1121 benign -0.587 Destabilizing 0.956 D 0.401 neutral N 0.456146972 None None I
L/K 0.5844 likely_pathogenic 0.507 ambiguous -1.0 Destabilizing 0.99 D 0.501 neutral None None None None I
L/M 0.1492 likely_benign 0.1381 benign -0.495 Destabilizing 0.923 D 0.321 neutral None None None None I
L/N 0.7476 likely_pathogenic 0.6726 pathogenic -0.934 Destabilizing 0.998 D 0.625 neutral None None None None I
L/P 0.5688 likely_pathogenic 0.4511 ambiguous -0.9 Destabilizing 0.999 D 0.635 neutral None None None None I
L/Q 0.3046 likely_benign 0.2519 benign -0.986 Destabilizing 0.923 D 0.357 neutral None None None None I
L/R 0.4544 ambiguous 0.3997 ambiguous -0.558 Destabilizing 0.995 D 0.595 neutral None None None None I
L/S 0.5832 likely_pathogenic 0.4866 ambiguous -1.652 Destabilizing 0.994 D 0.501 neutral N 0.47289777 None None I
L/T 0.4424 ambiguous 0.3785 ambiguous -1.45 Destabilizing 0.998 D 0.477 neutral None None None None I
L/V 0.1111 likely_benign 0.1069 benign -0.9 Destabilizing 0.956 D 0.417 neutral N 0.390614547 None None I
L/W 0.4944 ambiguous 0.4316 ambiguous -1.026 Destabilizing 1.0 D 0.606 neutral None None None None I
L/Y 0.6046 likely_pathogenic 0.5295 ambiguous -0.765 Destabilizing 0.999 D 0.525 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.