Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5731 | 17416;17417;17418 | chr2:178731575;178731574;178731573 | chr2:179596302;179596301;179596300 |
N2AB | 5414 | 16465;16466;16467 | chr2:178731575;178731574;178731573 | chr2:179596302;179596301;179596300 |
N2A | 4487 | 13684;13685;13686 | chr2:178731575;178731574;178731573 | chr2:179596302;179596301;179596300 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1578170411 | None | None | N | 0.173 | 0.179 | 0.0986583533028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0689 | likely_benign | 0.0685 | benign | -0.497 | Destabilizing | None | N | 0.124 | neutral | D | 0.531942036 | None | None | N |
S/C | 0.0865 | likely_benign | 0.0868 | benign | -0.354 | Destabilizing | 0.612 | D | 0.285 | neutral | N | 0.511269457 | None | None | N |
S/D | 0.346 | ambiguous | 0.3598 | ambiguous | 0.548 | Stabilizing | 0.072 | N | 0.202 | neutral | None | None | None | None | N |
S/E | 0.3861 | ambiguous | 0.3804 | ambiguous | 0.549 | Stabilizing | 0.016 | N | 0.205 | neutral | None | None | None | None | N |
S/F | 0.1223 | likely_benign | 0.1232 | benign | -0.832 | Destabilizing | 0.171 | N | 0.341 | neutral | N | 0.492911713 | None | None | N |
S/G | 0.0898 | likely_benign | 0.0932 | benign | -0.709 | Destabilizing | 0.016 | N | 0.223 | neutral | None | None | None | None | N |
S/H | 0.2221 | likely_benign | 0.2116 | benign | -0.941 | Destabilizing | 0.356 | N | 0.297 | neutral | None | None | None | None | N |
S/I | 0.0845 | likely_benign | 0.0837 | benign | -0.044 | Destabilizing | 0.013 | N | 0.3 | neutral | None | None | None | None | N |
S/K | 0.4353 | ambiguous | 0.4073 | ambiguous | -0.181 | Destabilizing | 0.001 | N | 0.131 | neutral | None | None | None | None | N |
S/L | 0.0757 | likely_benign | 0.0734 | benign | -0.044 | Destabilizing | 0.016 | N | 0.27 | neutral | None | None | None | None | N |
S/M | 0.1307 | likely_benign | 0.1187 | benign | -0.147 | Destabilizing | 0.214 | N | 0.297 | neutral | None | None | None | None | N |
S/N | 0.1032 | likely_benign | 0.1039 | benign | -0.179 | Destabilizing | 0.072 | N | 0.218 | neutral | None | None | None | None | N |
S/P | 0.786 | likely_pathogenic | 0.7869 | pathogenic | -0.162 | Destabilizing | None | N | 0.173 | neutral | N | 0.499406173 | None | None | N |
S/Q | 0.3043 | likely_benign | 0.2781 | benign | -0.22 | Destabilizing | 0.001 | N | 0.123 | neutral | None | None | None | None | N |
S/R | 0.3377 | likely_benign | 0.3118 | benign | -0.124 | Destabilizing | 0.038 | N | 0.297 | neutral | None | None | None | None | N |
S/T | 0.0621 | likely_benign | 0.0594 | benign | -0.252 | Destabilizing | None | N | 0.099 | neutral | N | 0.477704907 | None | None | N |
S/V | 0.0862 | likely_benign | 0.081 | benign | -0.162 | Destabilizing | None | N | 0.272 | neutral | None | None | None | None | N |
S/W | 0.2623 | likely_benign | 0.2857 | benign | -0.865 | Destabilizing | 0.864 | D | 0.387 | neutral | None | None | None | None | N |
S/Y | 0.121 | likely_benign | 0.1273 | benign | -0.531 | Destabilizing | 0.295 | N | 0.339 | neutral | N | 0.484010943 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.